AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aann3g01600 ATGGGTGATGAATCTTTATGTGATTATAAGGCCTCTAGTTCAAGTTTTATGTTTAATTCTTTAATGTTTGGTTATAAAGATATGACCTTTGACAAAAACTGGGGATTTAAGGATATGGGTCATGATCAAAATCATGAGATTGGTTATAAAGATATGAGATTTGATAAAAGTATGGGATTTAAGGATGTGGGTCATGATCAAGATTATGGTATGTTGCCTTCTGACCCTTTTGAGATGAATATTAGTAGTGGGTGTACAATGATTAGGGGTTGGATTCATGAGGTTGATGAGGATATCGGGTTTGTTAAATTTAGCGAAAAGTTAGATTTTGATGAAAAAATTGATAAGGGTGTGTGTTCGGTTGGTGATGGTGATGGTGATGGTGTGGTTCCGGATGGTTTGTTTTTTGCTCTTGGGTATTTAGGAACAAGGGATTTGGTTACGGTTGAGGGAGTTTGTAAATCTTTGCGTGATGGTGTTCAGAATGATCCGTTGCTTTGGAGGAGTGTGCACGTGGATCAACCGTTGGGTGAGTCGTTTGGTGATGAGGCTCTAATGAGGGTTACGGATAGAGCTAATGGTATGTTGCAGTCGTTGAGTCTTGTTAAATGTTTGAAGGTTACGGATGATGGTCTCAAGAGTGTTTTTCAGCGAAATCCAGGGCTTACGAAGCTAAGTGTGCTTGGATGTTACGGGCTTAGTGTGGAAGGTCTCTTAAGCAACTTGAAATCTTTGAAGTCTTCCGGGGGAAGTGGAATTAAACGGCTGAGAATTGGTGGATTGCATAGTGTAACAATGGAGCATTTTGAAGAGCTAAAGAAAGCATTGTTTATAGATAACCAAAAGCAACTCACTTCCAATAAACCACGATTCTATCATGGCGGGCAGCTGCATCTTTCGCTAGAGGATGACCGCCCAATTGATATAGAGGCGTGTCCCAAGTGTCATCAACTGAGACAAGTTTATGATTGTCCAGCCAAGACTTGTGAAGGGAGACGTAATAGTTGCAGGGCGTGTACATTTTGCATTCCTCGGTGTATCAATTGTGGGTGCTGCTTGAATGAACGGGATTACATGGAGACATTCTGTTTGGATTTCCTTTGTTTGGATTGTTTAACGCAGATCTTAAGTTTCACAGATGGCGAAGAGGAGGATATTAGTATTCATGGTTTCCATCGACAGGCAAGTTTTCATTTTTGCCTCTATGGCTAG 1212 40.68 MGDESLCDYKASSSSFMFNSLMFGYKDMTFDKNWGFKDMGHDQNHEIGYKDMRFDKSMGFKDVGHDQDYGMLPSDPFEMNISSGCTMIRGWIHEVDEDIGFVKFSEKLDFDEKIDKGVCSVGDGDGDGVVPDGLFFALGYLGTRDLVTVEGVCKSLRDGVQNDPLLWRSVHVDQPLGESFGDEALMRVTDRANGMLQSLSLVKCLKVTDDGLKSVFQRNPGLTKLSVLGCYGLSVEGLLSNLKSLKSSGGSGIKRLRIGGLHSVTMEHFEELKKALFIDNQKQLTSNKPRFYHGGQLHLSLEDDRPIDIEACPKCHQLRQVYDCPAKTCEGRRNSCRACTFCIPRCINCGCCLNERDYMETFCLDFLCLDCLTQILSFTDGEEEDISIHGFHRQASFHFCLYG 403
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aann3g01600 403 SUPERFAMILY F-box domain 136 171 IPR036047 GO:0005515(InterPro)
Aann3g01600 403 SUPERFAMILY RNI-like 196 246 - -
Aann3g01600 403 Gene3D Ribonuclease Inhibitor 134 321 IPR032675 -
Aann3g01600 403 PANTHER MITOCHONDRIAL ATP SYNTHASE COUPLING FACTOR B 133 372 IPR050648 GO:0005737(PANTHER)
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aann3g01600 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Aann Aann-Chr3:101064557 Aann3g02722 Aann-Chr3:125610717 dispersed
Aann Aann-Chr3:101064557 Aann5g04382 Aann-Chr5:134422667 wgd