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AGRP

Asteraceae Genomic Research Platform

Gene Search

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Genome Information

Note: Genome information of Asteraceae species collected in AGRP.

Gene Download

Genome Database

Order Subfamily Tribs Genus Genome Genome size Number of Chromosome Assembly level Use in our analysis cds lens gff pep Data source Sequencing platform/method Assembly method Date Reference
1AsteroideaeEupatorieaeAgeratinaAgeratina adenophora3.8 Gb2n=102ChromosomeNCBIPacBio SequelCanu v. 1.92025 Link
2AsteroideaeHeliantheaeAmbrosiaAmbrosia artemisiifolia1.3 Gb2n=36Scaffold√DownloadDownloadDownloadDownloadNCBIIlluminaMeraculous-2D v. 2.2.62022 Link
3AsteroideaeHeliantheaeAmbrosiaAmbrosia artemisiifolia1.1 Gb2n=36ChromosomeNCBIIllumina HiSeqHifiasm v. 20232023 Link
4AsteroideaeHeliantheaeAmbrosiaAmbrosia artemisiifolia1.1 Gb2n=36ChromosomeNCBIIllumina HiSeqHifiasm v. 20232023 Link
5AsteroideaeHeliantheaeAmbrosiaAmbrosia trifida1.7 Gb2n=24Chromosome√DownloadDownloadDownloadDownloadNCBIHifi ReadsHifiasm v. 0.16.1-r3752024 Link
6AsteroideaeHeliantheaeAmbrosiaAmbrosia x helenae2 Gb2n=24ChromosomeNCBIPacBio Sequel; Oxford Nanopore MinIONCANU+HiC v. 2.22024 Link
7AsteroideaeHeliantheaeAmbrosiaAmbrosia x helenae 1.1 Gb2n=36ChromosomeNCBIOxford Nanopore MinION; PacBio SequelCANU+HiC v. 2.22024 Link
8AsteroideaeAnthemideaeArtemisiaArtemisia annua1.5 Gb2n=18Chromosome√DownloadDownloadDownloadDownloadGPGDIllumina HiSeqCanu v1.82022 Link
9AsteroideaeAnthemideaeArtemisiaArtemisia annua1.8 Gb2n=18ScaffoldNCBIIlluminaMIRA v. 2.32020NA
10AsteroideaeAnthemideaeArtemisiaArtemisia annua1.8 Gb2n=18ScaffoldNCBI454; PacBio; IlluminaNewbler v. Oct-20142018 Link
11AsteroideaeAnthemideaeArtemisiaArtemisia annua 1.5 Gb2n=18ScaffoldNCBIIlluminaSPAdes v. 20242024IRIDIAN GENOMES INC
12AsteroideaeAnthemideaeArtemisiaArtemisia argyi3.89 Gb2n=34Chromosome√DownloadDownloadDownloadDownloadNGDCPacBio 130.0;Illumina HiSeq 4000 110.0Canu v2.22023 Link
13AsteroideaeAnthemideaeArtemisiaArtemisia argyi8 Gb2n=34ChromosomeNCBIPacBioHiFiasm v. 2022-04-212022 Link
14AsteroideaeAnthemideaeArtemisiaArtemisia argyi7.3 Gb2n=34ScaffoldNCBIPacBio Sequelmecat2 v. 1.02023 Link
15AsteroideaeAnthemideaeArtemisiaArtemisia argyi4.2 Gb2n=34ScaffoldNCBIOxford Nanopore PromethIONCanu v. 1.5; Wtdbg v. 2.0; Racon v. 1.0; Pilon v. 1.212024 Link
16AsteroideaeAnthemideaeArtemisiaArtemisia ifranensis504.1 MbNAScaffoldNCBIIlluminaSPAdes v. 20242024IRIDIAN GENOMES INC
17AsteroideaeAnthemideaeArtemisiaArtemisia ludoviciana1 GbNAScaffoldNCBIIlluminaSPAdes v. 20232023IRIDIAN GENOMES INC
18AsteroideaeAnthemideaeArtemisiaArtemisia princeps591.2 Mb2n=34ScaffoldNCBIIlluminaSPAdes v. 20232023 Link
19AsteroideaeAnthemideaeArtemisiaArtemisia tridentata3.9 Gb2n=18Chromosome√DownloadDownloadDownloadDownloadNCBIIllumina NovaSeqreference-guided v. NA2021 Link
20AsteroideaeAnthemideaeArtemisiaArtemisia tridentata4.2 Gb2n=18ChromosomeNCBIPacBio; Illumina HiSeqWTDBG2 v. 2.5; HiRise v. NA2022 Link
21AsteroideaeAnthemideaeArtemisiaArtemisia tridentata4.5 Gb2n=18ScaffoldNCBIIllumina NovaSeqHipMCL v. 1.1-27-g69eb61412021 Link
22AsteroideaeAnthemideaeArtemisiaArtemisia tridentata3.9 Gb2n=18ChromosomeNCBIIllumina HiSeqreference-guided v. NA2024 Link
23AsteroideaeCoreopsideaeBidensBidens alba3.75 Gb2n=48Chromosome√DownloadDownloadDownloadDownloadZenodoPacBio HiFiHifiasm v0.18.52024 Link
24AsteroideaeCoreopsideaeBidensBidens hawaiensis3.5 Gb2n=6x=72ContigNCBIPacBio Sequel II CCSCanu v. 2, HiCanu Fork2022 Link
25AsteroideaeCoreopsideaeBidensBidens hawaiensis2.9 Gb2n=6x=72ContigNCBIPacBio Sequel II CCSCanu v. 2, HiCanu Fork2022 Link
26AsteroideaeCalenduleaeCalendulaCalendula officinalis1.2 Gb2n=32ChromosomeNCBIPacBio,Arima2various2022 Link
27AsteroideaeCalenduleaeCalendulaCalendula officinalis328.4 Mb2n=32ContigNCBIPacBio,Arima2various2022 Link
28AsteroideaeCalenduleaeCalendulaCalendula officinalis486.8 Mb2n=32ContigNCBIIllumina NovaSeqCLC Genomics Workbench v. 202023NA
29AsteroideaeAnthemideaeChrysanthemumChrysanthemum indicum3.11 Gb2n=18Chromosome√DownloadDownloadDownloadDownloadFigShareIllumina NovaSeqNextGraph2024 Link
30AsteroideaeAnthemideaeChrysanthemumChrysanthemum indicum6.18 Gb2n=18ChromosomeFigShareIllumina NovaSeqHifiasm v0.19.72024 Link
31AsteroideaeAnthemideaeChrysanthemumChrysanthemum lavandulifolium2.7 Gb2n=18Chromosome√DownloadDownloadDownloadDownloadNCBIOxford Nanopore PromethION; PacBio RSIIWTDBG v. 2.52022 Link
32AsteroideaeAnthemideaeChrysanthemumChrysanthemum lavandulifolium3 Gb2n=18ScaffoldNCBIPacBio sequel; Hiseq XPlatanus_allee v. 2.2.2; Flye v. 2.5; HiRise2021 Link
33AsteroideaeAnthemideaeChrysanthemumChrysanthemum lavandulifolium2.7 Gb2n=18ScaffoldNCBIIllumina HiSeq2000; Illumina MiSeqSOAPdenovo v. 2.0.4; SSPACE v. 2.0; GapCloser v. 1.10; GapFiller v1-102019 Link
34AsteroideaeAnthemideaeChrysanthemumChrysanthemum makinoi3.19 Gb2n=18Chromosome√DownloadDownloadDownloadDownloadNCBIILLUMINA,OXFORD_NANOPORE,PACBIO_SMRTSmartdenovo,Purge Haplotigs,ntEdit,DoveTail-Chicago/HiRise,AllMaps2022 Link
35AsteroideaeAnthemideaeChrysanthemumChrysanthemum morifolium8.15 Gb2n=54Chromosome√DownloadDownloadDownloadDownloadFigSharePacBio SMRTFALCON2023 Link
36AsteroideaeAnthemideaeChrysanthemumChrysanthemum nankingense3.5 Gb2n=18Chromosome√DownloadDownloadDownloadDownloadCGDPacBio Sequel（CLR）, Illumina HiSeq,10X Genomics , Hi-CFalcon, Quiver, Pilon, Supernova, AllHiC2023 Link
37AsteroideaeAnthemideaeChrysanthemumChrysanthemum nankingense5.7 Gb2n=18ChromosomeCGDPacBio Sequel（CLR）, Illumina HiSeq,10X Genomics , Hi-CFalcon, Quiver, Pilon, Supernova, AllHiC2023 Link
38AsteroideaeCoreopsideaeCosmosCosmos bipinnatus1.02 Gb2n=24Chromosome√DownloadDownloadDownloadDownloadZenodoPacBio HiFiHifiasm v0.18.52024 Link
39AsteroideaeCoreopsideaeDahliaDahlia pinnata7.86 Gb2n=64Chromosome√DownloadDownloadDownloadDownloadZenodoPacBio HiFiHifiasm v0.18.52024 Link
40AsteroideaeMadieaeDeinandraDeinandra increscens subsp. villosa1.7 GbNAScaffold√NCBIOxford Nanopore PromethIONFlye v. 2.9.1-b17802024 Link
41AsteroideaeInuleaeDittrichiaDittrichia graveolens834.9 Mb2n=18ScaffoldNCBIPacBio Sequel II; NextSeq 550Hifiasm, 3D-DNA v. 0.16.1-r375, 1809222023 Link
42AsteroideaeInuleaeDittrichiaDittrichia graveolens824.4 Mb2n=18ScaffoldNCBIPacBio Sequel II; NextSeq 550Hifiasm, 3D-DNA v. 0.16.1-r375, 1809222023 Link
43Asteroideae AstereaeErigeronErigeron breviscapus 1.43 Gb2n=18Chromosome√DownloadDownloadDownloadDownloadMPODPacBio RSII; Illuminawtdbg v. v1.1.006; LACHESIS v. Jul-20182021 Link
44Asteroideae AstereaeErigeronErigeron breviscapus1.2 Gb2n=18ScaffoldGICAPacBio; IlluminaMaSuRCA v3.1.3, Platanus v1.2.1,DBG2OLC, Minimus2 (AMOS v3.1.0),Bowtie2 v2.1.0,SAMtools,Pilon2017 Link
45Asteroideae AstereaeErigeronErigeron canadensis426.2 Mb2n=18Chromosome√DownloadDownloadDownloadDownloadNCBIPacBio; Illumina; Hi-CCANU v. 1.8; Proximo v. 2.02020 Link
46Asteroideae AstereaeErigeronErigeron canadensis326.2 Mb2n=18ContigNCBI454; Illumina HiSeq; PacBioNewbler v. 2.6; SOAPdenovo v. 1; CLC NGS Cell v. Mar-20132014 Link
47Asteroideae AstereaeErigeronErigeron philadelphicus619.6 Mb2n=18ScaffoldNCBIIlluminaSPAdes v. 20212022 Link
48AsteroideaeGnaphalieaeFilagoFilago lutescens648.4 Mb2n=28ChromosomeNCBIPacBio,Arima2various2022 Link
49AsteroideaeGnaphalieaeFilagoFilago lutescens646.2 Mb2n=28ScaffoldNCBIPacBio,Arima2various2022 Link
50AsteroideaeTageteaeFlaveriaFlaveria bidentis1 Gb2n=36Scaffold√DownloadDownloadDownloadDownloadNCBIIllumina HiSeq 2000MaSuRCA v. 2.0.12021 Link
51AsteroideaeTageteaeFlaveriaFlaveria brownii924.1 Mb2n=36Scaffold√DownloadDownloadDownloadDownloadNCBIIllumina HiSeq 2000MaSuRCA v. 3.2.42021 Link
52AsteroideaeTageteaeFlaveriaFlaveria floridana1.6 Gb2n=36Scaffold√DownloadDownloadDownloadDownloadNCBIIllumina HiSeq 2000MaSuRCA v. 3.2.42021 Link
53AsteroideaeTageteaeFlaveriaFlaveria linearis1.7 Gb2n=36Chromosome√DownloadDownloadDownloadDownloadNCBIPacBio; IlluminaHera v. 1.02020 Link
54AsteroideaeTageteaeFlaveriaFlaveria ramosissima1.3 Gb2n=36Chromosome√DownloadDownloadDownloadDownloadNCBIPacBio; IlluminaPilon v. 2.10.42020 Link
55AsteroideaeTageteaeFlaveriaFlaveria robusta551.5 Mb2n=36Chromosome√DownloadDownloadDownloadDownloadNCBIPacBio; Illumina HiSeqCanu v. 01-JAN-20202020 Link
56AsteroideaeTageteaeFlaveriaFlaveria robusta518.9 Mb2n=36ScaffoldNCBIIllumina HiSeq 2000MaSuRCA v. 2.0.12021 Link
57AsteroideaeTageteaeFlaveriaFlaveria sonorensis1.2 Gb2n=36Chromosome√DownloadDownloadDownloadDownloadNCBIPacBio; Illumina HiSeqCanu v. 01-JAN-20202020 Link
58AsteroideaeTageteaeFlaveriaFlaveria trinervia1.8 Gb2n=36Chromosome√DownloadDownloadDownloadDownloadNCBIPacBio; Illumina HiSeqCanu v. 01-JAN-20202020 Link
59AsteroideaeAnthemideaeGlebionisGlebionis coronaria6.8 Gb2n=18Chromosome√DownloadDownloadDownloadDownloadFigSharePacBio SequelHifiasm v. MAY-20222022 Link
60AsteroideaeGnaphalieaeGnaphaliumGnaphalium uliginosum354.4 Mb2n=14ChromosomeNCBIPacBio,Arima2Hifiasm,purge_dups, YaHS,OATK,TreeVal2022 Link
61AsteroideaeGnaphalieaeGnaphaliumGnaphalium uliginosum14.6 Mb2n=14ContigNCBIPacBio,Arima2various2022 Link
62AsteroideaeHeliantheaeHelianthusHelianthus annuus3 Gb2n=34Chromosome√DownloadDownloadDownloadDownloadNCBIPacBio RSIICANU v. 1.3; CANU v. 1.4; FALCON v. 0.7; Bionano-Solve v. 3.2.1_041220182020 Link
63AsteroideaeHeliantheaeHelianthusHelianthus annuus3 Gb2n=34ChromosomeNCBIPacBio SequelCANU v. 1.92023 Link
64AsteroideaeHeliantheaeHelianthusHelianthus annuus3 Gb2n=34ChromosomeNCBIPacBio SequelCANU v. 1.92023 Link
65AsteroideaeHeliantheaeHelianthusHelianthus annuus3.2 Gb2n=34ChromosomeNCBIPacBio SequelCANU v. 1.92023 Link
66AsteroideaeHeliantheaeHelianthusHelianthus annuus3.2 Gb2n=34ChromosomeSGDIllumina, Roche 454 GS FLX2020 Link
67AsteroideaeHeliantheaeHelianthusHelianthus annuus3.01 Gb2n=34ChromosomeNGDCPacBio 17.5Hybrid Scaffolding (Optical map + PacBio Hifi) Bionano Hybrid Scaffold2024 Link
68AsteroideaeHeliantheaeHelianthusHelianthus annuus 3.1 Gb2n=34ChromosomeNCBIPacBio SequelCANU v. 1.92023 Link
69AsteroideaeHeliantheaeHelianthusHelianthus annuus 3.2 Gb2n=34ChromosomeNCBIPacBio SequelCANU v. 1.92023 Link
70AsteroideaeHeliantheaeHelianthusHelianthus annuus 3 Gb2n=34ChromosomeNCBIPacBio SequelCANU v. 1.92023 Link
71AsteroideaeHeliantheaeHelianthusHelianthus annuus 3 Gb2n=34ChromosomeNCBIPacBio RSIICANU v. 1.42023 Link
72AsteroideaeHeliantheaeHelianthusHelianthus annuus 3.1 Gb2n=34ChromosomeNCBIPacBio SequelCANU v. 1.92023 Link
73AsteroideaeHeliantheaeHelianthusHelianthus anomalus6.1 Gb2n=34ChromosomeNCBI10x, DovetailsAllMaps v. 20202024 Link
74AsteroideaeHeliantheaeHelianthusHelianthus tuberosus10.49 Gb2n=6x=102Chromosome√DownloadDownloadDownloadDownloadNGDCPacBio 14.7HiFiasm 0.16.1-r3752024 Link
75AsteroideaeHeliantheaeHelianthusHelianthus tuberosus21.6 Gb2n=6x=102ChromosomeNCBIPacBio Sequel IIHiFiasm v. 0.16.1-r3752024 Link
76AsteroideaeGnaphalieaeHelichrysumHelichrysum umbraculigerum1.3 GbNAScaffold√DownloadDownloadDownloadDownloadNCBIPACBIO_SMRT,ILLUMINAhifiasm2023 Link
77AsteroideaeGnaphalieaeLogfiaLogfia minima544.9 Mb2n=30Chromosome√DownloadDownloadDownloadDownloadNCBIPacBio,Arima2Hifiasm,purge_dups, YaHS,OATK,TreeVal2022 Link
78AsteroideaeGnaphalieaeLogfiaLogfia minima5.9 Mb2n=30ContigNCBIPacBio,Arima2various2022 Link
79AsteroideaeAnthemideaeMatricariaMatricaria chamomilla2.6 Gb2n=18ScaffoldNCBIPacBio,Arima2various2025 Link
80AsteroideaeAnthemideaeMatricariaMatricaria chamomilla2.5 Gb2n=18ChromosomeNCBIPacBio,Arima2various2025 Link
81AsteroideaeAnthemideaeMatricariaMatricaria chamomilla var. recutita2.8 Gb2n=18ChromosomeNCBIIllumina Novaseq 6000, PacBio Sequel IITRITEX, hifiasm2025 Link
82AsteroideaeEupatorieaeMikaniaMikania micrantha1.8 Gb2n=38Chromosome√DownloadDownloadDownloadDownloadNCBIPacBio RSII; PacBio SequelCanu v. 1.6; FALCON v. 1.2.0; FALCON-Unzip v. 1.1.12020 Link
83AsteroideaeGnaphalieaeOmalothecaOmalotheca supina1.1 Gb2n=28ChromosomeNCBIPacBio,Arima2various2022 Link
84AsteroideaeGnaphalieaeOmalothecaOmalotheca supina1.1 Gb2n=28ScaffoldNCBIPacBio,Arima2various2022 Link
85AsteroideaeInuleaePlucheaPluchea indica1.78 Gb2n=40Scaffold√DownloadDownloadDownloadDownloadNGDCPacBio, PacBio SMRT sequencing; 10X, 10X Genomics; stLFR, single tube long fragment read; Hi-C, high-throughput chromosome conformation capture; Illumina, paired-end and mate-paired sequencing.Quiver (SMRT Analysis v.2.3.0),Racon v.1.3.12022 Link
86AsteroideaeGnaphalieaePseudognaphaliumPseudognaphalium luteoalbum881.3 Mb2n=14Chromosome√DownloadDownloadDownloadDownloadNCBIPacBio,Arima2Hifiasm2022 Link
87AsteroideaeGnaphalieaePseudognaphaliumPseudognaphalium luteoalbum6.7 Mb2n=14ContigNCBIPacBio,Arima2various2022 Link
88AsteroideaeInuleaePulicariaPulicaria dysenterica609.7 Mb2n=18Scaffold√DownloadDownloadDownloadDownloadNCBIPacBio,Illumina,Arima2various2023 Link
89AsteroideaeInuleaePulicariaPulicaria dysenterica833.2 Mb2n=18ChromosomeNCBIPacBio,Illumina,Arima2Hifiasm2023 Link
90AsteroideaeHeliantheaeRudbeckiaRudbeckia hirta571.1 MbNAScaffoldNCBIIlluminaSPAdes v. 20222023NA
91AsteroideaeHeliantheaeScalesiaScalesia atractyloides3.2 Gb2n=4x=68ScaffoldNCBIPacbio, Dovetailwtdbg2, DoveTailHiRise2022 Link
92AsteroideaeSenecioneaeSenecioSenecio squalidus652 Mb2n=20Scaffold√DownloadDownloadDownloadDownloadNCBIPacBio,Illumina,HiCvarious2023 Link
93AsteroideaeSenecioneaeSenecioSenecio squalidus161.2 Mb2n=20ScaffoldNCBIPacBio,Illumina,HiCvarious2022 Link
94AsteroideaeHeliantheaeSilphiumSilphium perfoliatum121.7 Mb2n=14ContigNCBIIon Proton InstrumentVSEARCH followed by POA2019 Link
95AsteroideaeHeliantheaeSilphiumSilphium perfoliatum121.7 Mb2n=14ContigNCBIIon Proton InstrumentVSEARCH followed by POA (Lee et al. 2002)2019 Link
96AsteroideaeMillerieaeSmallanthusSmallanthus sonchifolius2.72 Gb2n=58Chromosome√DownloadDownloadDownloadDownloadNCBIPacBio HiFiHifiasm v. 0.14.22022 Link
97Asteroideae AstereaeSolidagoSolidago azorica479.4 Mb2n=18ScaffoldNCBIIlluminaSPAdes v. 20242024IRIDIAN GENOMES INC
98Asteroideae AstereaeSolidagoSolidago caesia473.7 Mb2n=18Scaffold√DownloadDownloadDownloadDownloadNCBIIlluminaSPAdes v. 20222023IRIDIAN GENOMES INC
99Asteroideae AstereaeSolidagoSolidago canadensis855 Mb2n=18Chromosome√DownloadDownloadDownloadDownloadOur studyNANANANA
100AsteroideaeEupatorieaeSteviaStevia rebaudiana1405 Mb2n=22Chromosome√DownloadDownloadDownloadDownloadFigShareIllumina, PacBio, Hi-CWTDBG v1.2.8, FALCON v0.7, Canu v1.52021 Link
101AsteroideaeEupatorieaeSteviaStevia rebaudiana411.4 Mb2n=22ScaffoldNCBIIlluminaSPAdes v. 20212020 Link
102AsteroideaeTageteaeTagetesTagetes patula434.6 Mb2n=24ScaffoldNCBIIlluminaSPAdes v. 20222022NA
103AsteroideaeTageteaeTagetesTagetes erecta778.9 Mb2n=24Chromosome√DownloadDownloadDownloadDownloadNCBIPacBio HiFiHifiasm v. 0.16.1 June-20232023 Link
104AsteroideaeTageteaeTagetesTagetes erecta621.2 Mb2n=24ChromosomeNCBIPacBio; Illumina NovaSeq; HiCCANU v. 2.02023 Link
105AsteroideaeAnthemideaeTanacetumTanacetum coccineum9.5 Gb2n=36?ScaffoldNCBIIllumina NovaSeq 6000; Illumina Miseq; PacBio Sequel IISOAPdenovo v. 2.04-r240; SSPACE-longread v. 1-1; SSPACE-STANDARD v. 3.02022 Link
106AsteroideaeAnthemideaeTanacetumTanacetum parthenium (feverfew)2.1 Gb2n=18ChromosomeNCBIPacBio,Arima2various2022 Link
107AsteroideaeAnthemideaeTanacetumTanacetum parthenium (feverfew)2.1 Gb2n=18ScaffoldNCBIPacBio,Arima2various2022 Link
108AsteroideaeAnthemideaeTanacetumTanacetum vulgare (tansy)4.6 Gb2n=18ChromosomeNCBIPacBio,Arima2various2024 Link
109AsteroideaeAnthemideaeTanacetumTanacetum vulgare (tansy)4.8 Gb2n=18ScaffoldNCBIPacBio,Arima2various2024 Link
110CarduoideaeCardueaeArctiumArctium lappa1.79 Gb2n=36Chromosome√DownloadDownloadDownloadDownloadFigShareIllumina HiSeq;PacBioFALCON2022 Link
111CarduoideaeCardueaeArctiumArctium lappa1.73 Gb2n=36ChromosomeNCBIPacBio HiFiHifiasm v. 0.14.22022 Link
112CarduoideaeCardueaeArctiumArctium minus1.9 Gb2n=36Chromosome√DownloadDownloadDownloadDownloadNCBIPacBio,Arima2Hifiasm2022 Link
113CarduoideaeCardueaeArctiumArctium minus465.4 Mb2n=36ContigNCBIPacBio,Arima2various2022 Link
114CarduoideaeCardueaeCarduusCarduus pycnocephalus2.7 GbNAScaffoldNCBIIllumina NovaSeq; PacBio Sequel; Dovetail Omni-CHiFiasm v. 0.19.5-r592; SALSA v. 2; YAGCloser v.NANA
115CarduoideaeCardueaeCarduusCarduus pycnocephalus2.7 GbNAScaffoldNCBIIllumina NovaSeq; PacBio Sequel; Dovetail Omni-CHiFiasm v. 0.19.5-r592; SALSA v. 2; YAGCloser v.NANA
116CarduoideaeCardueaeCarthamusCarthamus tinctorius1.06 Gb2n=24Chromosome√DownloadDownloadDownloadDownloadsafflowerPacBio;Illumina HiSeq 2500 sequencingCANU v.1.32021 Link
117CarduoideaeCardueaeCarthamusCarthamus tinctorius661.9 Mb2n=24ScaffoldNCBIIllumina HiSeqSOAPdenovo v. 2.012016 Link
118CarduoideaeCardueaeCarthamusCarthamus tinctorius1.17Gb2n=24ChromosomeNGDCnanopore 100.0Canu 1.712023 Link
119CarduoideaeCardueaeCentaureaCentaurea solstitialis765.1 Mb2n=16Chromosome√DownloadDownloadDownloadDownloadNCBIPacBio Sequel; Illumina HiSeqWtdbg2 v. 2021; HiRise v. 20212024 Link
120CarduoideaeCardueaeCynaraCynara cardunculus725 Mb2n=34Chromosome√DownloadDownloadDownloadDownloadNCBIIllumina HiSeqAllPaths v. 416842016 Link
121CarduoideaeCardueaeCynaraCynara cardunculus859.1 Mb2n=34ScaffoldNCBIIllumina NovaSeq; PacBio Sequel; Dovetail Omni-CHiFiasm v. 0.19.9-r616; SALSA v. 2; YAGCloser v.NANA
122CarduoideaeCardueaeCynaraCynara cardunculus858 Mb2n=34ScaffoldNCBIIllumina NovaSeq; PacBio Sequel; Dovetail Omni-CHiFiasm v. 0.19.9-r616; SALSA v. 2; YAGCloser v.NANA
123CarduoideaeCardueaeSaussureaSaussurea bogedaensis2.2 Gb2n=30ChromosomeNCBIPacBioABySS v. 2.0.2NANA
124CarduoideaeCardueaeSaussureaSaussurea involucrata2.5 Gb2n=32Chromosome√DownloadDownloadDownloadDownloadNCBIPacBio HiFiHiFiasm v. 0.16.12023 Link
125CarduoideaeCardueaeSilybumSilybum marianum1.5 Gb2n=34ContigNCBIIllumina Hiseq; PacBioCelera Assembler v. MAY-20152017 Link
126CarduoideaeCardueaeSilybumSilybum marianum694.4 Mb2n=34ChromosomeNCBIOxford Nanopore PromethION; Illumina NovaSeqNextDenovo v. 2.5.02024 Link
127CichorioideaeCichorieaeCichoriumCichorium endivia887 Mb2n=18Chromosome√DownloadDownloadDownloadDownloadNCBIPacBio HiFiHifiasm v. 0.14.22022 Link
128CichorioideaeCichorieaeCichoriumCichorium endivia641 Mb2n=18ChromosomeNGDCIllumina;ONTNECAT;Racon2022 Link
129CichorioideaeCichorieaeCichoriumCichorium intybus926 Mb2n=18Chromosome√DownloadDownloadDownloadDownloadORCAEPacBio,Illumina HiSeq2500,NextSeq500Medaka v0.11.2,Racon,BUSCO2023 Link
130CichorioideaeCichorieaeCichoriumCichorium intybus1.28 Gb2n=18ChromosomeNCBIPacBio HiFiHifiasm v. 0.14.22023 Link
131CichorioideaeCichorieaeCichoriumCichorium intybus1.8 Gb2n=18ScaffoldNCBIPacBio Sequel; BionanoGenomics SaphyrFlye v. 2.5; Racon v. 1.3.3; Arrow v. 2.3.3; Bionano Solve v. 3.4.1; Bionano Access v. 1.4.32023 Link
132CichorioideaeCichorieaeLactucaLactuca sativa var. crispa2.6 Gb2n=18ChromosomeNCBIPacBioHiFiasm v. 0.19NANA
133CichorioideaeCichorieaeLactucaLactuca saligna2.2 Gb2n=18Chromosome√DownloadDownloadDownloadDownloadNCBIIlluminaHiRise2023 Link
134CichorioideaeCichorieaeLactucaLactuca sativa1.1 Gb2n=18ContigNCBIIllumina GAIIxCLC Genomics Workbench v. 4.5.12011The Compositae Genome Project
135CichorioideaeCichorieaeLactucaLactuca sativa2 Gb2n=18ScaffoldNCBIIllumina HiSeq2018 Link
136CichorioideaeCichorieaeLactucaLactuca sativa2.2 Gb2n=18ScaffoldNCBIHiSeq 15002018 Link
137CichorioideaeCichorieaeLactucaLactuca sativa2.59 Gb2n=18ChromosomeFigShareHiFi,ONT,Hi-C2024 Link
138CichorioideaeCichorieaeLactucaLactuca sativa2.6 Gb2n=18ChromosomeNCBIPacBio HiFi; Oxford Nanopore technologyHifiasm v. 0.19.5; flye v. 2.9.2NANA
139CichorioideaeCichorieaeLactucaLactuca sativa cv. Salinas2.4 Gb2n=18Chromosome√NCBIIllumina HiSeqSOAPdenovo v. 2; Hi-Rise v. 12017 Link
140CichorioideaeCichorieaeLactucaLactuca sativa var. angustana2.59 Gb2n=18ChromosomeLettuceGDBIllumina;PacBioBioNano Solve;WTDBG22023 Link
141CichorioideaeCichorieaeLactucaLactuca serriola2.8 Gb2n=18ContigLettuceGDBNANA2021 Link
142CichorioideaeCichorieaeLactucaLactuca virosa3.4 Gb2n=18ScaffoldNCBIIlluminaHiRise2023 Link
143CichorioideaeCichorieaePilosellaPilosella piloselloides3.3 GbNAScaffoldNCBIIllumina HiSeq; Oxford Nanopore MinIONMaSuRCA v. May-20192023 Link
144CichorioideaeCichorieaeTaraxacumTaraxacum kok-saghyz1.08 Gb2n=16Chromosome√DownloadDownloadDownloadDownloadNGDCPacBio 100.0CANU 2.02021 Link
145CichorioideaeCichorieaeTaraxacumTaraxacum kok-saghyz1.29 Gb2n=16ContigNGDCPacBio;Illumina HiSeqNA2018 Link
146CichorioideaeCichorieaeTaraxacumTaraxacum mongolicum790Mb3x=24Chromosome√DownloadDownloadDownloadDownloadNGDCPacBio 100.0CANU 2.02021 Link
147CichorioideaeCichorieaeTragopogonTragopogon pratensis2.1 Gb2n=12ChromosomeNCBIPacBio,Arima2various2022 Link
148CichorioideaeCichorieaeTragopogonTragopogon pratensis2 Gb2n=12ScaffoldNCBIPacBio,Arima2various2022 Link
149MutisioideaeMutisieaseGerberaGerbera hybrida2.23G2n=50Chromosome√DownloadDownloadDownloadDownloadFigSharePacBioNA2026 Link
150NANABuxusBuxus sinica 764 Mb2n=28Chromosome√DownloadDownloadDownloadDownloadthe Dryad Digital RepositoryPacBio;Hi-CMAKER2022 Link
151NANAEupteleaEuptelea pleiosperma613.4 Mb2n=28Chromosome√DownloadDownloadDownloadDownloadNCBIPacBioARROW v. 2.32024 Link
152NANANelumboNelumbo nucifera807.01 Mb2n=16Chromosome√DownloadDownloadDownloadDownloadCoGeNanopore,Hi-C3D-DNA2022 Link
153NANANymphoidesNymphoides indica523.96 MB2n=18Chromosome√DownloadDownloadDownloadDownloadCNGBdbPACBIO 227xNextDenovo v2.12022 Link
154NANATetracentronTetracentron sinense 908 Mb2n=38Chromosome√DownloadDownloadDownloadDownloadthe Dryad Digital RepositoryPacBio;Hi-CMAKER2022 Link
155NAViteaeVitisVitis vinifera487 Mb2n=38Chromosome√DownloadDownloadDownloadDownloadJGIArachneGAZE2007 Link
156VernonioideaeVernonieaeCentrapalusCentrapalus pauciflorus1.4 Gb2n=36Scaffold√DownloadDownloadDownloadDownloadNCBIIllumina HiSeq; PacBio RSII; PacBio SequelMaSuRCA v. 3.2.82021NA