Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Aann4g00755 | ATGAACAAACTTGGAAGAGGGCATCGCGACAAGATCCAACAGTTTGTAACCATCACTGGAGCAAGTGAAAAAGTTGCTACTCAGACCTTGAAGGCCAGTGATTGGCACCTGGATGGTGCATTTGACATCTTCTACAGCCAGCCTCAACCAAAATCATCATTCGCAGAGACACGACATATCGAGGAGTTATACAACAGATACAAAGATCCTTATGCTGATATGATTATGGCTGATGGTATCAGCAATCTATGCAATGACCTTCAGGTTGATCCTCAAGATATCGTTATGCTGGTTGTCTCGTGGCACATGAAGGCTGCTACAATGTGTGAATTCTCAAAGCAGGAATTTGTTGGTGGCTTGCAGTCTCTTGGGATAGATTCACTGGAAAAATTCCGTGATCGGATCCCATCTATACGTTCTGAACTGAAAGATGATCAAAAATTCAAGGAGATCTATAATTTTGCATTCGGCTGGGCAAAGGAGAAGGGTCAGAAGTCTCTGGCATTGGACACAGCAATTGGAATGTGGCAGTTGCTGTTTGAAGAAAAACAGTGGCCATTGGTTGAACATTGGTGCCAGTTCTTACAGGCACGGCATAACAAAGCTATTTCTAGAGACACGTGGTCACAACTGCTGGAATTTGCACGAAGCGTGGATCCTACACTATCAAATTACGATGCTGAAGGTGCGTGGCCATATCTACTTGATGAATTTGTTGAGTACCTAAAGGAGAACGGCATTATTCAGCAAAAGGGTCGTGTGCTCGATTTGCTAGGCCATATCTAA | 786 | 43.77 | MNKLGRGHRDKIQQFVTITGASEKVATQTLKASDWHLDGAFDIFYSQPQPKSSFAETRHIEELYNRYKDPYADMIMADGISNLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFVGGLQSLGIDSLEKFRDRIPSIRSELKDDQKFKEIYNFAFGWAKEKGQKSLALDTAIGMWQLLFEEKQWPLVEHWCQFLQARHNKAISRDTWSQLLEFARSVDPTLSNYDAEGAWPYLLDEFVEYLKENGIIQQKGRVLDLLGHI | 261 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Aann4g00755 | 261 | CDD | UBA-DCNL | 8 | 48 | - | - | |
| Aann4g00755 | 261 | Gene3D | - | 54 | 143 | - | - | |
| Aann4g00755 | 261 | Gene3D | Cullin, PONY binding domain | 144 | 252 | IPR042460 | - | |
| Aann4g00755 | 261 | ProSiteProfiles | DCUN1 domain profile. | 55 | 243 | IPR005176 | - | |
| Aann4g00755 | 261 | SUPERFAMILY | UBA-like | 7 | 46 | IPR009060 | GO:0005515(InterPro) | |
| Aann4g00755 | 261 | FunFam | Defective in cullin neddylation protein | 6 | 47 | - | - | |
| Aann4g00755 | 261 | Gene3D | - | 6 | 47 | - | - | |
| Aann4g00755 | 261 | FunFam | Defective in cullin neddylation protein | 144 | 249 | - | - | |
| Aann4g00755 | 261 | Pfam | Cullin binding | 131 | 241 | IPR005176 | - | |
| Aann4g00755 | 261 | FunFam | Defective in cullin neddylation protein | 54 | 143 | - | - | |
| Aann4g00755 | 261 | Pfam | UBA-like domain | 9 | 48 | - | - | |
| Aann4g00755 | 261 | PANTHER | RP42 RELATED | 24 | 245 | IPR014764 | GO:0000151(PANTHER)|GO:0031624(PANTHER)|GO:0032182(PANTHER)|GO:0045116(PANTHER)|GO:0097602(PANTHER) |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Aann4g00755 | K17822 | DCN1-like protein 1/2 |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Aann | Aann-Chr1:141576460 | Aann4g00755 | Aann-Chr4:49691968 | dispersed | |
| Aann | Aann-Chr4:49691968 | Aann3g01334 | Aann-Chr3:94137079 | transposed |