Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Aann4g00763 | ATGATGAATAGTAATCCAGCTACTCCGATGAACGCAAACGCCCCCTCTTCAAGTGGATCTCCCGATCCAAACACTCCCAGACGCAACTCTAAGCGACCTAAATATTCTAGGTTTACACAGCAGGAGCTTCCAGCTTGCAAACCGATTCTTACCCCCAAATGGGTGATATCAGCATTCATGCTTGTGACGATTGTCTTCATCCCAATAGGACTTGCTTCCCTCTTCGCATCTCGTGATGTTGTTGAGATTGTTGACCGGTACGACAACGCCTGCCTAACAGGCTCAAAAAGTCAAAAGGTTCAAGCTATACAATCTGCTACTACTAATAAAACCTGTGTCAGGACCATAACAGTTTCAAAGCGAATGAAGCAGCCTATCTACATCTATTATCAGCTCGATAACTTCTATCAGAATCATCGCAGGTATGTCAAGAGCCGAAGTGATACTCAGTTGAGAAACCGAGGTGACGAGAACGACACAAGTACATGCAAGCCTGAAAATGAGGACGCAAATGGAAGGCCGATTGTGCCCTGTGGTCTTGTAGCATGGAGTTTGTTTAATGACACTTATAGCTTCTCCACAAGCAACCGAGAATTGCGTGTAAACAAGAGGCATATTTCATGGAAGAGTGACAGGGATGACAAGTTTGGCAGTGACGTCTTTCCGAAAAATTTCCAGAAAAATGAAACTCTTGTTGGTGGTGGAACTCTCAATGAGTCTATACCGTTAAGTGAGCAAGAAGACCTAATCGTGTGGATGCGAACTGCGGCTCTTCCAACTTTTAGGAAGTTGTATGGGAAGATAGAAGAAGATATTGAGGCGGGCGAGACAATAAACGTGGTATTAGAGAACAGATACAACACATATAGTTTCAGTGGCAAAAAGAAACTCGTGCTTTCGACAACCAGCTGGCTTGGTGGAAAGAATAACTTTATTGGCATTGCATATCTTGCTGTTGGTGGCTTGTGCTTCTTACTAGCAACAACTTTCACCATCATATATTTGTTTAAGCCAAGGCATCTTGGAGATCCTAGTTATTTGTCATGGAACCGGAACCCAGGTGGTCACTGA | 1071 | 43.79 | MMNSNPATPMNANAPSSSGSPDPNTPRRNSKRPKYSRFTQQELPACKPILTPKWVISAFMLVTIVFIPIGLASLFASRDVVEIVDRYDNACLTGSKSQKVQAIQSATTNKTCVRTITVSKRMKQPIYIYYQLDNFYQNHRRYVKSRSDTQLRNRGDENDTSTCKPENEDANGRPIVPCGLVAWSLFNDTYSFSTSNRELRVNKRHISWKSDRDDKFGSDVFPKNFQKNETLVGGGTLNESIPLSEQEDLIVWMRTAALPTFRKLYGKIEEDIEAGETINVVLENRYNTYSFSGKKKLVLSTTSWLGGKNNFIGIAYLAVGGLCFLLATTFTIIYLFKPRHLGDPSYLSWNRNPGGH | 356 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Aann4g00763 | 356 | PIRSF | Lem3-Cdc50 | 2 | 352 | IPR005045 | GO:0016020(InterPro) | |
| Aann4g00763 | 356 | MobiDBLite | consensus disorder prediction | 146 | 166 | - | - | |
| Aann4g00763 | 356 | PANTHER | CELL CYCLE CONTROL PROTEIN 50 | 27 | 348 | IPR005045 | GO:0005783(PANTHER)|GO:0005794(PANTHER)|GO:0005886(PANTHER)|GO:0016020(InterPro) | |
| Aann4g00763 | 356 | MobiDBLite | consensus disorder prediction | 1 | 26 | - | - | |
| Aann4g00763 | 356 | MobiDBLite | consensus disorder prediction | 1 | 37 | - | - | |
| Aann4g00763 | 356 | MobiDBLite | consensus disorder prediction | 146 | 169 | - | - | |
| Aann4g00763 | 356 | Pfam | LEM3 (ligand-effect modulator 3) family - CDC50 family | 74 | 339 | IPR005045 | GO:0016020(InterPro) |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Aann4g00763 | K26935 | cell cycle control protein 50 |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Aann | Aann-Chr1:5850738 | Aann4g00763 | Aann-Chr4:49839673 | transposed | |
| Aann | Aann-Chr1:78548395 | Aann4g00763 | Aann-Chr4:49839673 | transposed | |
| Aann | Aann-Chr1:78550515 | Aann4g00763 | Aann-Chr4:49839673 | transposed | |
| Aann | Aann-Chr3:52413495 | Aann4g00763 | Aann-Chr4:49839673 | transposed | |
| Aann | Aann-Chr5:105877472 | Aann4g00763 | Aann-Chr4:49839673 | transposed | |
| Aann | Aann-Chr5:127369192 | Aann4g00763 | Aann-Chr4:49839673 | transposed | |
| Aann | Aann-Chr1:78547258 | Aann4g00763 | Aann-Chr4:49839673 | wgd |