AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aann4g00904 ATGACTGGCATACAACTTGAGGTAGTATTAGAGGACCAGTCTCCACATAAATGGCGTGTTCCTTTAAAAGAAGACGTTTTTGCTGCATTTATGGCCAAAGGAGGTCCAATGGTGCATAAGAACCCGTGTGTGGATTGGTTTCAAACGGACGGGTGTTATATTCTAAAATCCGAACTACCAAAATTAGAAAAAATCAGCATTCAGGTTTATGTCGACAATGGGAAAGTTATGGAAATCAGTGGGCTATGGAAACACAAAGGAGAATCCCGTGCAACAGACTGGAGGAGTGGCAAATGGTGGGAACATGGCTTTGTTCGGAGGCTAGAATTGCCAGAAAACACAGATTGGAAGAAAATTGAGGCGTATGTGACTAATGACACGATTTTGGACATTAGACTTCCAAAGACTTCACTGGAATGCAATGTTCCTAGAGGAAACTTGGGGGTGCTCAAAGAATCTGCATCTGCTAGCACTTAA 477 42.56 MTGIQLEVVLEDQSPHKWRVPLKEDVFAAFMAKGGPMVHKNPCVDWFQTDGCYILKSELPKLEKISIQVYVDNGKVMEISGLWKHKGESRATDWRSGKWWEHGFVRRLELPENTDWKKIEAYVTNDTILDIRLPKTSLECNVPRGNLGVLKESASAST 158
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aann4g00904 158 ProSiteProfiles Small heat shock protein (sHSP) domain profile. 35 150 IPR002068 -
Aann4g00904 158 Gene3D - 18 142 IPR008978 -
Aann4g00904 158 SUPERFAMILY HSP20-like chaperones 29 137 IPR008978 -
Aann4g00904 158 PANTHER 21.7 KDA CLASS VI HEAT SHOCK PROTEIN 4 40 - -
Aann4g00904 158 Pfam Hsp20-alpha crystallin family 46 138 IPR002068 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aann4g00904 - -