AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aann4g00951 ATGCAGCAACCAAACAAAACCTCAGATTCAGACCTCCCATCCCTCGCCACAATCAAAGTCAAATCCTCCTCCCCTCGTTTCCGATCCACCACCACTTCCTCAACCGACACCCCAACCGCCGGCGCCCAACGTCGTATCGGCATCGCCGTCGACTTATCCGACGAATCCGCATTCGCCGTCAAATGGGCCGTTCACCAATACCTCCGCCCTGGGGACGCCGTGATCCTAATCCACGTCCGGCCCACTTCCGTCCTCTACGGCGCCGATTGGGGCTCCGTGGATTTAGCCCTTTCTGACAACGACCCAGATGAGAAAACCAAAGAAAAGCTCGAAAATGACTTTGATTTGTTTACTAGTAATAAAAGTGCTGATATAGCTGGGCCGTTAGTTGAGGCTGGTATACCGTATAAGATACATATAGTGAAGGATCATGATATGAAGGAGAGGCTGTGTTTGGAAGTTGAGAGGCTGGGTTTAAGTGCTGTCATTATGGGGAGTAGGGGAGTTGGGAGGATGAGAAGCGGCGAAGGCGACGGGAGGTTAGGGAGTGTTAGTGATTATTGTGTCAGGCATTGTGTTTGTCCTGTTGTTGTTGTGAGGTTTCCTGATGAGAAGGAGGTTGTGCATGAGGGTGGCGCGGTTGTTAAGGTGGCGAAAGGGGTTCATGACGAGGAGGGTGATGAGGAGGAGAGTGAGTTTCATGATGCCAGCGATGAGCGGAAATGCATAGATGGAGTGGTCTCTTTGCGAATCTTCAGTATCAAGGATGACGAGAAGGCATTGCAGTCTGCAAAGTCGAGATGA 804 51.24 MQQPNKTSDSDLPSLATIKVKSSSPRFRSTTTSSTDTPTAGAQRRIGIAVDLSDESAFAVKWAVHQYLRPGDAVILIHVRPTSVLYGADWGSVDLALSDNDPDEKTKEKLENDFDLFTSNKSADIAGPLVEAGIPYKIHIVKDHDMKERLCLEVERLGLSAVIMGSRGVGRMRSGEGDGRLGSVSDYCVRHCVCPVVVVRFPDEKEVVHEGGAVVKVAKGVHDEEGDEEESEFHDASDERKCIDGVVSLRIFSIKDDEKALQSAKSR 267
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aann4g00951 267 PANTHER OS01G0783500 PROTEIN 1 241 IPR044162 -
Aann4g00951 267 Pfam Universal stress protein family 44 200 IPR006016 -
Aann4g00951 267 CDD USP-Like 45 199 - -
Aann4g00951 267 MobiDBLite consensus disorder prediction 1 40 - -
Aann4g00951 267 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 44 202 - -
Aann4g00951 267 Gene3D HUPs 32 210 IPR014729 -
Aann4g00951 267 PRINTS Universal stress protein signature 178 200 IPR006015 -
Aann4g00951 267 PRINTS Universal stress protein signature 43 61 IPR006015 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aann4g00951 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Aann Aann-Chr4:55745234 Aann5g02115 Aann-Chr5:72744166 dispersed
Aann Aann-Chr1:147736866 Aann4g00951 Aann-Chr4:55745234 transposed
Aann Aann-Chr4:83638889 Aann4g00951 Aann-Chr4:55745234 transposed
Aann Aann-Chr8:23570057 Aann4g00951 Aann-Chr4:55745234 transposed
Aann Aann-Chr4:55745234 Aann4g01965 Aann-Chr4:83924922 wgd