AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aann4g00971 ATGTTGAGCCTTTGCGTATTGTGTATTATTGATATTAGGCCTTTGTGCTCTTCCTTATTCAGTATTGTTAAGATGCTCATAACAAAAACAAAGTGTTTCTCTTTCATTAATTATTGGTGCATCCCTCAGGTGAGATCGGCTACACTTGACACATGGCTTCCCGAGCAGGTTGCATTTATCCAGTCTATGGGAAATGAGAGGTCAAATAGTTATTGGGAAGCAGAGCTACCGCCAAATTATGATAGAGTTGGCATTGAAAATTTTATTCGGGCTAAGTATGAAGACAAAAGATGGGTTGCTAAAGATGGAAGACCAGTTTCATCTCCTACAGTGCGAGAAGAAAACGTGCAGTCGCATAAACCTGTTGAGAGTCCTGCTAGTGAAAGAAAGAGCTATCAAACACGTACTGCAACAAGCAACAGCAGTGTTTCAAGATTCAATCTTCGTGTGCCTCCAAAAGGACCTGAACCGGTGATACAACAGAAAGCTGAGGCAGCAGTTCCCTCTGCTGAGGTGGCAAAGGAGGTTGTTGATACCGTCTCTCCTCCTAAAGTTGATTTTGCTACTGATCTTTTTGATATGCTATCAATGGACGATGGTCCTACTGAGAAAGTTCCAGTAGCAGCTTCTTCCACAGATGATTTATGGGCAGGATTTCAATCTGCCGGTGAAGTAGCAATTACAGGTACAACAGATGTTACAAAACCTGTTGACAATAATAAGACCAAGCCCTCTTCTGGAATAGAAGATTTATTCAAAGATTCACCTTCTCTCTTACAACCTAACGTGTCGGAAAAGCCTAAGAAGGATGTCAAAAATGATATTATGAGCCTTTTTGAGAAGAGTAATACTACGACATCACCATATGCTCTTCATCAACAGCAACTTGCTATGCTAGCTCAGCAGCAGTACTTAATAATGGCTGCTGCAGCTAAATCAGGTGGCTTGCCAAAATTTACTGGGAATGGGCAACCAGTACCTGGTGGTACAAATTTGCCCAATCAAAATTGGACAAATGTTGGCTATCAAGTTCCTGGAATGAATATGCCAGTTCCTGGGAATGATGACTTAGCGAAATATTTACAGCAGATGGGAAACATGGGAGCATCAAATCCAGCTGGGAATTCATTTCAGGTTCCAACATCCAGTATGTACACCATGGGCCTGAACGCCCCTACCAATGGTATGACGCCACCCGGAAATATGATGGGACAAAGTTCATCTTTTAGCAGCATGGGCCCCTCTGGAGCATCTAAACCACAATCTGCTTCTCAAGTATCATCTGCATCTCCTTCCCAGTCTGCCAAAGACTTCGATTTCTCCTCGTTAACTCAAGGGATGTTCTCAAAACCGTAA 1356 42.55 MLSLCVLCIIDIRPLCSSLFSIVKMLITKTKCFSFINYWCIPQVRSATLDTWLPEQVAFIQSMGNERSNSYWEAELPPNYDRVGIENFIRAKYEDKRWVAKDGRPVSSPTVREENVQSHKPVESPASERKSYQTRTATSNSSVSRFNLRVPPKGPEPVIQQKAEAAVPSAEVAKEVVDTVSPPKVDFATDLFDMLSMDDGPTEKVPVAASSTDDLWAGFQSAGEVAITGTTDVTKPVDNNKTKPSSGIEDLFKDSPSLLQPNVSEKPKKDVKNDIMSLFEKSNTTTSPYALHQQQLAMLAQQQYLIMAAAAKSGGLPKFTGNGQPVPGGTNLPNQNWTNVGYQVPGMNMPVPGNDDLAKYLQQMGNMGASNPAGNSFQVPTSSMYTMGLNAPTNGMTPPGNMMGQSSSFSSMGPSGASKPQSASQVSSASPSQSAKDFDFSSLTQGMFSKP 451
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aann4g00971 451 MobiDBLite consensus disorder prediction 233 269 - -
Aann4g00971 451 Pfam Putative GTPase activating protein for Arf 41 101 IPR001164 GO:0005096(InterPro)
Aann4g00971 451 SUPERFAMILY ArfGap-RecO-like zinc finger 41 100 IPR037278 -
Aann4g00971 451 SMART arf-gap-3 21 106 IPR001164 GO:0005096(InterPro)
Aann4g00971 451 Gene3D Arf GTPase activating protein 5 105 IPR038508 -
Aann4g00971 451 PANTHER ADP-RIBOSYLATION FACTOR GTPASE-ACTIVATING PROTEIN AGD5 41 450 IPR044520 GO:0005096(InterPro)
Aann4g00971 451 MobiDBLite consensus disorder prediction 392 451 - -
Aann4g00971 451 ProSiteProfiles ARF GTPase-activating proteins domain profile. 1 106 IPR001164 GO:0005096(InterPro)
Aann4g00971 451 MobiDBLite consensus disorder prediction 103 154 - -
Aann4g00971 451 MobiDBLite consensus disorder prediction 127 147 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aann4g00971 - -
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Event-related genes

Select Gene_1 Gene_2 Event_name
2462 Aann4g00971 Aann5g00891
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Aann Aann-Chr2:3651610 Aann4g00971 Aann-Chr4:56160693 wgd
Aann Aann-Chr4:56160693 Aann5g00891 Aann-Chr5:22895321 wgd