AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

leaf

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aann4g00977 ATGGTGGCCATCTTATCCTTCACCACATCCCCAACAAACTTCGGAGTAATCAACAATAACAATTTAAACAGAACATTATCATCATCATCATCATCATCATCATCATCAGCAGCAGCAGTAGTTTCATTAAAGTCAAGCTCACAAATCACTGTACCTAATAACAGTAACCTTCATCAACATTATCCCCCATTGTTTGTTCCCGAGGTTGAGAGTGCAGTGGATACATTGTATCCGGAGTTCAGGGCAGTGGATAATCTTGTGGCACGTAATACATCTAGAGTTCTCAAAGCTTTTCAAAACGCCAGAGTTGGAGCTCATCACTTTGGTGGTTGCACTGGCTATGGCCATGAAGAAGCTGGAGGTCGAGAAGCCCTTGACCAAGCTTTTGCAGAAATTTTTGGTGCCGAGTCAGCAATTGTCCGGTCACAGTTCTTCTCAGGTACTCATGCTATTACGTGTGCACTTTTTGCTTTCTTGAGGCCAGGCGATGAGCTTTTGGCAGTTGCTGGTGCTCCATATGATACACTTGAGGAAGTTATAGGAATCAGGGATGGCAATGGATTAGGTTCCCTGAAAGATTTTGGAATCAAGTATCGGGAAGTTGCACTTGCAGATGATGGAGGACTTGATTGGGATGCTCTTGAGGTCGCTTTAAAACCTGAAACGAAATGTGCCCTTATTCAGAGGTCGTGTGGGTATTCTTGGCGTAAAAGCTTAAGTGTGACTGAAATTTCTAGGGCAATAGACATCATTAAGAGGCAAAATCCAAATTGTATGGTTATGGTGGATAACTGCTATGGTGAATTCACAGAAGCAATTGAGCCTCCAATGGTGGGTGCAGATCTTATTGCAGGAAGTTTAATTAAAAATCCGGGTGGGACAATTGCACCATGTGGTGGATACGTTGCAGGAAAAGAAAAATGGGTAAACGCAGCAGCAGCTCGCCTGTCTGCTCCAGGTCTCGGGGTTGACTGCGGGTCAACTCCTGGTGACATTATGCGAACATTCTTTCAAGGATTATATCTCTCGCCTCAAATGGTTGGGGAAGCAATAAAGGGAGGCTTGCTGATTGCTGAGGTTATGTCAACAAAAGGTTACAAGGTTCAGCCACTTCCTCGAGTACCCCGTCATGACATAGTGCAGGCTGTACAACTTGGAAGCCGTGAGAAGCTTCTTGCGTTTTGTGAGGCTGTACAAAGAAGCTCACCTGTAAGCTCTTATACCAAACCAATTGCAGGTTCATCAGCTGGATATGCTTCAGAGGTTATATTTGCTGATGGGACGTTTATAGATGGAAGCACGAGTGAGCTCTCGTGTGATGGACCGTTAAGGGAGCCATTTAGTGTCTTCTGTCAGGGTGGTACTCACTGGACTCAATGGGGACTAGTTCTTGGTGAAATCTTGAAATCATTGTAG 1416 44.63 MVAILSFTTSPTNFGVINNNNLNRTLSSSSSSSSSSAAAVVSLKSSSQITVPNNSNLHQHYPPLFVPEVESAVDTLYPEFRAVDNLVARNTSRVLKAFQNARVGAHHFGGCTGYGHEEAGGREALDQAFAEIFGAESAIVRSQFFSGTHAITCALFAFLRPGDELLAVAGAPYDTLEEVIGIRDGNGLGSLKDFGIKYREVALADDGGLDWDALEVALKPETKCALIQRSCGYSWRKSLSVTEISRAIDIIKRQNPNCMVMVDNCYGEFTEAIEPPMVGADLIAGSLIKNPGGTIAPCGGYVAGKEKWVNAAAARLSAPGLGVDCGSTPGDIMRTFFQGLYLSPQMVGEAIKGGLLIAEVMSTKGYKVQPLPRVPRHDIVQAVQLGSREKLLAFCEAVQRSSPVSSYTKPIAGSSAGYASEVIFADGTFIDGSTSELSCDGPLREPFSVFCQGGTHWTQWGLVLGEILKSL 471
leaf

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aann4g00977 471 PANTHER CYS OR MET METABOLISM PYRIDOXAL-PHOSPHATE-DEPENDENT ENZYME 36 471 IPR009651 -
Aann4g00977 471 SUPERFAMILY PLP-dependent transferases 93 441 IPR015424 -
Aann4g00977 471 Gene3D - 117 325 IPR015421 -
Aann4g00977 471 Gene3D - 66 116 - -
Aann4g00977 471 Pfam Methionine gamma-lyase 70 469 IPR009651 -
Aann4g00977 471 Gene3D - 326 471 - -
leaf

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aann4g00977 - -