Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Aann4g01000 | ATGGGTAAAAAACGAAAGCACGCAGAAGTGGAAGCAGTGGCGGAGAAGAAAGAGAACGTGGCACCGGAGAGACCACCTAGGACTCTTTTCGGCTGGAAAAACAAACCCACTGAAAATGACCAACAAACTTTTAGGAATAAAGAGAAAGTCCTTGTTACTTGTTCTCGTAGGATCAATTACAGGTATCGGCATTTGATGTTGAATTTGGTGTCGATTTTGCCGCATTGCAAGAAAGATAACAAAGTTGAGTCTAAAGCTACCAAAGGTGCAACTTTGAATGAGCTTGTTGAGCTCAAGAATTGTTCTTCATGTCTCTTCTTTGAGTGTAGGAAACACAAGGACCTTTACTTGTGGATGTCAAAGTGCCCAAATGGTCCATCTGTGAAGTTTTTGGTGAATGCAGTTCACACAATGGAAGAGTTAAAGCTCACTGGAAACCATCTTAAAGGCGCACGCCCTCTTCTTACCTTTTCATCAAATTTTGATAAAGACCCACACTGGAAACTTCTCAAGGAGATGATTACTCAGATATTTGGAACTCCAAAGGAGCACAGGAAATCAAAGCCCTATTATGACCATGTGTTTGTGTTCTCTATCGTTGATGACCACATATGGTTCCGTAATTACCAGATATCCTGTCCACATACTGGAGATGATAAAATCGATCGAGGGGGCCTTGACAAGATGACCCTTATTGAGGTTGGTCCAAGGTTTTGTTTAAATCCAATCAAGATATTTGGTGGTAGCTTTGGAGGTCCAACTCTATATGAGAATCCGTTCTATGTTTCACCAAATCAGATACGGTCATTAGAGAAGAGAAAGAAGGCTGGTAAGTATGCAAACAAGGTTAAAGCCAAGACAAAAAGAAACATGCATACGATGGAAAACCAATTGGTATCTGATGAAATAGAAGGCTTGTGGAAGGCATAA | 930 | 40.86 | MGKKRKHAEVEAVAEKKENVAPERPPRTLFGWKNKPTENDQQTFRNKEKVLVTCSRRINYRYRHLMLNLVSILPHCKKDNKVESKATKGATLNELVELKNCSSCLFFECRKHKDLYLWMSKCPNGPSVKFLVNAVHTMEELKLTGNHLKGARPLLTFSSNFDKDPHWKLLKEMITQIFGTPKEHRKSKPYYDHVFVFSIVDDHIWFRNYQISCPHTGDDKIDRGGLDKMTLIEVGPRFCLNPIKIFGGSFGGPTLYENPFYVSPNQIRSLEKRKKAGKYANKVKAKTKRNMHTMENQLVSDEIEGLWKA | 309 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Aann4g01000 | 309 | MobiDBLite | consensus disorder prediction | 1 | 23 | - | - | |
| Aann4g01000 | 309 | SMART | Brix-2 | 51 | 245 | IPR007109 | GO:0006364(InterPro)|GO:0019843(InterPro) | |
| Aann4g01000 | 309 | Pfam | Brix domain | 55 | 244 | IPR007109 | GO:0006364(InterPro)|GO:0019843(InterPro) | |
| Aann4g01000 | 309 | Gene3D | - | 48 | 240 | - | - | |
| Aann4g01000 | 309 | SUPERFAMILY | Class II aaRS ABD-related | 49 | 248 | - | - | |
| Aann4g01000 | 309 | FunFam | Ribosome biogenesis protein, putative | 49 | 240 | - | - | |
| Aann4g01000 | 309 | MobiDBLite | consensus disorder prediction | 1 | 27 | - | - | |
| Aann4g01000 | 309 | ProSiteProfiles | Brix domain profile. | 48 | 251 | IPR007109 | GO:0006364(InterPro)|GO:0019843(InterPro) | |
| Aann4g01000 | 309 | PANTHER | RIBOSOME BIOGENESIS PROTEIN BRIX | 2 | 308 | IPR026532 | GO:0000027(PANTHER)|GO:0003723(PANTHER)|GO:0005730(PANTHER) |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Aann4g01000 | K14820 | ribosome biogenesis protein BRX1 |