AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aann4g01014 ATGACTGGACTGTCATTGGATATAAGAACACAGAGTTATGGATCACCTCAGCAGCCGCAGAATGGTTCATTGCAAACTCAAAATGGTTTCATTGTACGCAAGTCTTCCAGGATGTCGTTGTCTGGTTCGAGAGAGAAGGATAGATTTCTTACATTTTTGTGCAGATATTTAAGTAGAAAGAAGGTTGTAATGATGATTTTAGTGTCATTTGCTTTCATGGCTTTCTTGTCGGGGTTCTTTACCTCCAATAGAGAAGCTGCATCAGAGCGCACTATCTTCAATCCTTTTAACGAGACATTTAATACCTCTTTCCAGTTTGCTAGATATGGTAATCAGAAATACAATAATTCTTCCATGGAGACAACTCTGTCTGTATGTGAAGTGAACCCCCCTACTCGTCGTTATTCGGATGCATCACCTTCTACAGGATCCGTTATTTCTCATAGCAATTTGTGTAAGAATTTTGCATTTCCTCCTCCTCCTCCAGGTGATAGGAGACGACCTGGACCTCGACCTTGTCCTGTATGTTACCTTCCAGTGGAGGAGGCTATGGCTAGCATGCCGAACTCACCGTCACCATCACCGGTGCTTCAAGAGTTAAGTTATTTCCATGAGGGGACATCTACTAAAACTGAGCCACATGAAGGCTCTGACTTTGGCGGGTATCCTTCCTTAAAGCAAAGGAATGAATCGTTTGATATTAAAGAATCCATGACCGTGCATTGTGGATTTGTAAAAGGATGCAGACCTGGTTACCAAACTGGATTTGATATTGATGTATCTGATCTTGTGGAGTTGGAGCAGTATCATGATATCATTGTTGCATCAGCCATATTTGGAAATTATGATGTAATTCAACAGCCTACTAAAATTAGCGAGGCTGCAAGTAGGAACATTCCGTTTTACATGTTTATTGATGAAGAGACTGAAGCATATATGAGAAATTCTAGTGCTTTGGACTACAGAATGAAGGTTGGATTGTGGAGAATTATTGTTGTCCGCAACATACCTTACACTGATTCAAGACGCAATGGAAAGGTCCCCAAGCTTCTACTACACAGAATCTTCCCAAATGTCCGGTATTCTATATGGATTGATGGGAAGCTGCGACTCGTTGTGGACCCATATAAACTTCTAGAGAGGTTCTTGTGGCGCCACAATGCGACTTTTGCAATTTCGAAACATTATAGGCGATTTGATGTGTTTGAAGAAGCTGAAGCTAACAAGGCTGCCGGGAAATACGACAATGCGTCCATTGATTACCAGATTGATTTTTACAGAAATGAGGGTTTAACACCTTATTCTGAAGCTAAGCTTCCCATAATCAGTGATGTACCTGAAGGGTGTGTAATCATACGGGAACACATTCCGATAACAAATCTCTTCACGTGTTTGTGGTTCAATGAAGTTGACCGCTTTACTTCAAGGGATCAGTTAAGTTTTGGTATTGTAAGGGACAAAATCATGGCTCAAGTCAACTGGAGCATCAATATGTTTATGGATTGTGAAAGACGGAACTTTGTGATACAGGCATACCACCGGGATCTACTAGAGCATATGCCACCACCTGCACCTAAAGTGATTAATTTAAGGCGTACCCGAGCTCCTATTCCTGTTCCTGTATCTGTGCGAGTTAATTCACCTGCTAGATATTCAGCAAAGAAAAACCCTGTTCGACGGAAAGGTGAAAGGAGACCTCGTTCAAGGAGGCATCCAAAAAATCCCACTAATAGGGACAACACGGTCTTTTGA 1752 41.67 MTGLSLDIRTQSYGSPQQPQNGSLQTQNGFIVRKSSRMSLSGSREKDRFLTFLCRYLSRKKVVMMILVSFAFMAFLSGFFTSNREAASERTIFNPFNETFNTSFQFARYGNQKYNNSSMETTLSVCEVNPPTRRYSDASPSTGSVISHSNLCKNFAFPPPPPGDRRRPGPRPCPVCYLPVEEAMASMPNSPSPSPVLQELSYFHEGTSTKTEPHEGSDFGGYPSLKQRNESFDIKESMTVHCGFVKGCRPGYQTGFDIDVSDLVELEQYHDIIVASAIFGNYDVIQQPTKISEAASRNIPFYMFIDEETEAYMRNSSALDYRMKVGLWRIIVVRNIPYTDSRRNGKVPKLLLHRIFPNVRYSIWIDGKLRLVVDPYKLLERFLWRHNATFAISKHYRRFDVFEEAEANKAAGKYDNASIDYQIDFYRNEGLTPYSEAKLPIISDVPEGCVIIREHIPITNLFTCLWFNEVDRFTSRDQLSFGIVRDKIMAQVNWSINMFMDCERRNFVIQAYHRDLLEHMPPPAPKVINLRRTRAPIPVPVSVRVNSPARYSAKKNPVRRKGERRPRSRRHPKNPTNRDNTVF 583
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aann4g01014 583 MobiDBLite consensus disorder prediction 206 225 - -
Aann4g01014 583 Pfam TOD1-MUCI70, glycosyltransferase-like domain 200 513 IPR048354 -
Aann4g01014 583 PANTHER ALKALINE CERAMIDASE-RELATED 36 542 IPR006852 -
Aann4g01014 583 MobiDBLite consensus disorder prediction 554 572 - -
Aann4g01014 583 MobiDBLite consensus disorder prediction 1 27 - -
Aann4g01014 583 MobiDBLite consensus disorder prediction 546 583 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aann4g01014 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Aann Aann-Chr2:7274995 Aann4g01014 Aann-Chr4:56979449 dispersed
Aann Aann-Chr4:56979449 Aann6g04926 Aann-Chr6:154182715 dispersed
Aann Aann-Chr1:99071614 Aann4g01014 Aann-Chr4:56979449 transposed
Aann Aann-Chr4:56979449 Aann4g02043 Aann-Chr4:84815933 wgd