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AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aann4g01022 ATGAAAATGGAACCCCAAGAAAACCACCCATCTCCAGCCAACTCACCATCATCCAACTGCAGCACCACCACACAAACACCACCAGTAACACCACGACCCATCACAAGATCCGACCCAAATCCATACCCTACCACCTTTGTTCAAGCTGACACTTCTTCATTCAAACAAGTTGTCCAAATGCTAACTGGATCATCCCAGCAACAAGATCCATCAAATGGGTCAAACGGGTCAAATGGGTCGAACCCTTCTTCAAAGGTATCATCATCAATCCCACCTGTGAAAAAACAAAGCTTCAAACTATATGAACGTAGGAACAGTTTGAACTTAAAAAACGGGTTAATGATAAACCCAATGGGTCCAAGATTCGGGTCGAGTTCATCATCACCAAGGGTTCAAGAGCTTTTGTCACCAAGTATACTTGATTTTCCATCCTTGGTTTTAAGTCCAGTGACACCATTAGTTGAAGATCCATTTGATAAAAAAGAAGAAGAAAGGGTTATTAAGGAAAAAGGGTTTTATTTACATCCGTCACCCAGAGCAGTGGCAACAACACGTGGCTCTGCTGAGCCACGCTTGTTGCCACTTTTCCCGGTGACGTCCCCGAGATCATCTTTGAGTTAG 621 43.8 MKMEPQENHPSPANSPSSNCSTTTQTPPVTPRPITRSDPNPYPTTFVQADTSSFKQVVQMLTGSSQQQDPSNGSNGSNGSNPSSKVSSSIPPVKKQSFKLYERRNSLNLKNGLMINPMGPRFGSSSSSPRVQELLSPSILDFPSLVLSPVTPLVEDPFDKKEEERVIKEKGFYLHPSPRAVATTRGSAEPRLLPLFPVTSPRSSLS 206
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aann4g01022 206 Pfam VQ motif 41 66 IPR008889 -
Aann4g01022 206 MobiDBLite consensus disorder prediction 1 99 - -
Aann4g01022 206 MobiDBLite consensus disorder prediction 8 31 - -
Aann4g01022 206 PANTHER VQ MOTIF-CONTAINING PROTEIN 11-LIKE 17 204 IPR039611 -
Aann4g01022 206 MobiDBLite consensus disorder prediction 39 94 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aann4g01022 - -
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Event-related genes

Select Gene_1 Gene_2 Event_name
352 Aann1g02424 Aann4g01022
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Aann Aann-Chr2:8352177 Aann4g01022 Aann-Chr4:57108962 dispersed
Aann Aann-Chr4:57108962 Aann9g00442 Aann-Chr9:11193110 dispersed
Aann Aann-Chr1:73158023 Aann4g01022 Aann-Chr4:57108962 wgd
Aann Aann-Chr4:57108962 Aann4g02050 Aann-Chr4:84893542 wgd