AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

leaf

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aann4g01036 ATGGCAGAAGAAGAATACTCTCTAGTTGATACTTCAAAGCTTCTTCAAGCAGCTTCTGATTTTTCCTTTGATCCTGGTACTCGATCAGAAGCTGCTGTTAAGGAATTTCTTAGTTCCTTTCCCCTTCCTCTTATTATCAATGCTTTGCAAACAAAAGGAGATGTGCCTGGTTTGGAGGATGCACTGATTCATTGTTTAGAGAAGATATTTAGAACAAAATATGGGGCCTCTCTCATCCCACATTTCATGTCTTTCATCGTGGTCGGCCTGCAAGCATACTCTCAGAGAGTCAGAAATTTGTCGTGCAAAACGGTCTCAAGCCTTTTGGAGAATCTTGAAGACAATACTGGCTTAGCTACTTCACTGATCAAAGAGAATGGCGTGTATCCCCTTCTGCTTAATTGTCTCATTGACGGGGATGAACAAGTGGCTGTTGCTGCAACAGAAGCGATCAGAAGTTTAGCGCGCTCTCAACAGGGGATAGAGATCATATTCCCGGCTACTCCCGATGAAAGCACAGATATTACAAAGCTAGCAGCAAGATGTTCTTCACTGGGACGAGTACGCGTTCTAGCGTTGATAGTGAAACTATTTTCTGCTTCAAGTGCAGCTGCAACGTTAGTTCACAACTCAAATCTTCTTGGTCTTCTGGAGGCAGAAATTCGCAATGCTAATGACACACTTATAACTTTGAGTGTTTTGGAGCTCCTTTATGAGTTGGCTGAGGTCCATCATGGAATGGAATATGTACTTGGGACGAATATCTTGCAGCTACTTATTTCAATAATCAGGAATTCTTCTGCTGAATCGATGTTGAGATCAAGGGCAATGATGATAAGTGGGCGGCTGTTATCGAAAGAGAACGTTTTCACGTTTATAGATGAATCTGGTGTTAAAGCTGTGATTTCAGCTATTGATGAACGGCTTTCATTACTAGATAGTCAAGATGCAGATGAATGCGAATGTGGTCTTGAAGCCTTAGGTCAAATAGGGTCATCAACTAAAGGAGCTGTATTGCTACTTTCAAACACATCTGCTGCTAAACATGTTGTTAACACTGCTTTTAACTTACATGGTCGTGGCAGACAACTGGCAGCATTGCATTCTCTTGGGAACATTGCAGGAGAAACTCGGCCCGAGGAAAACAAATTGCTGAATGCTGATGCCGAAGAAAGCCTTCGTAGATTGGTTTATGAAACAGCATCCAGCACTCCAAAGCTCATACCTTCGGGTCTTGTTCTTGCAATTCTGAAACTCGAGTCTGAATTTCGGATCGCGGGTTATAGGTTGATAACAGGATTGGCTGCTAGACCATGGTTTCTGGTGGAAATCTGTTCTAGACAAGAGATAATAAACATATTGACGGATTCATATACGGAAACAACTAAAATAGGTATGGAGGCCAAATTCTACTGTTGTGAGGCCATTTATAAGGCTATTGCATTCTCGTCTAAACTTCTTGGTGATCCAGCTCTTTCTGAGACAGCAGAAAAGCTTTCGGAAGCTATTAAAAAGGGCCCTTATCTTGCAAAAGGACGACACCGTGAAGCACAACCTGAAGTCGCAACTGCTGACAGATTTTAG 1584 42.3 MAEEEYSLVDTSKLLQAASDFSFDPGTRSEAAVKEFLSSFPLPLIINALQTKGDVPGLEDALIHCLEKIFRTKYGASLIPHFMSFIVVGLQAYSQRVRNLSCKTVSSLLENLEDNTGLATSLIKENGVYPLLLNCLIDGDEQVAVAATEAIRSLARSQQGIEIIFPATPDESTDITKLAARCSSLGRVRVLALIVKLFSASSAAATLVHNSNLLGLLEAEIRNANDTLITLSVLELLYELAEVHHGMEYVLGTNILQLLISIIRNSSAESMLRSRAMMISGRLLSKENVFTFIDESGVKAVISAIDERLSLLDSQDADECECGLEALGQIGSSTKGAVLLLSNTSAAKHVVNTAFNLHGRGRQLAALHSLGNIAGETRPEENKLLNADAEESLRRLVYETASSTPKLIPSGLVLAILKLESEFRIAGYRLITGLAARPWFLVEICSRQEIINILTDSYTETTKIGMEAKFYCCEAIYKAIAFSSKLLGDPALSETAEKLSEAIKKGPYLAKGRHREAQPEVATADRF 527
leaf

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aann4g01036 527 Gene3D - 10 406 IPR011989 -
Aann4g01036 527 Pfam Proteasome non-ATPase 26S subunit 82 524 IPR019538 GO:0043248(InterPro)
Aann4g01036 527 PANTHER 26S PROTEASOME NON-ATPASE REGULATORY SUBUNIT 5-RELATED 1 527 IPR019538 GO:0005829(PANTHER)|GO:0043248(InterPro)
Aann4g01036 527 SUPERFAMILY ARM repeat 82 397 IPR016024 -
leaf

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aann4g01036 K06692 26S proteasome non-ATPase regulatory subunit 5