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AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aann4g01046 ATGTTTTTTCACAGTAAAACCGTTGGGGGGGCTCACAGCCTGTTGCAAGCTGTCATAATCCTTTCGACCCATGTGACCCACCACCATCTTCCCACCAAAATCACTAAAAAATATTCATTTCTTACATTGTTATATAGTTGTGTACAGTTCTTATTCATCCATTTGCTCATATCAATAATATATCTCTTTGTTTTGTTTCTTGCTATACTGATATCAATGGCACAATTGCCGCCAAAAGTGCCAACAATGGCGCAAAATTGGCTCTCATATCCTTATAATCAAATGATGTCAATGCCATCTTCGGCTGCTCAGCCGCCGAATTGGGTTGATGAGTTTCTCGATTTTTCTTCAGTGAGGAGGAATACGCATAGAAGATCTGTGAGCGATCCTATCGCGTTTGTGGAGTCTCCTTTTATTGAAGAATGCGGTAATACTAATGGGAATTGTGGTAATAATAATAGTGTTGGATTTGAACGGTTGGATGATGAGCAGTTTAGTTCGATGTTTGCTGATGACGTTGGGACGACGAATGTGCCTACCTCGACTAGATCTTCGTCAAATCCTTCTACGCCTTCAGATCAAAATAGTGATAATGATGAGGGGAAAGTTACATTGCCACTAGACCAACACAAGCACCAACAAGAGCAACAGCAGCAGCAACAACAACAGCCGAAGAACGAGCCTGGTGAGGTAGAAGATGGGAGTGGTTGTCAACCTGAGATGGATTCGGCTAAACCGTGCTTTAATTTCTCAAGCGATGGTAGCACCATTGTTGATCCAAAGAGAGTGAAAAGGATTTTGGCAAATCGTCAATCTGCTCAGAGATCACGAGTGAGAAAGTTGCAATATATTTCTGAACTGGAACGCAGTGTTACTACATTACAGACCGAAGTATCTGCATTGTCACCACGGGTAGCGTTTTTGGACCACCAAAGATTGGTTCTAAATGTTGATAACAGCGCGCTCAAGCAACGAATAGCAGCTTTGGCTCAAGACAAGATTTTCAAAGATGCACATCAAGAAGCATTAAAGAAAGAGATCGAGAGGTTACGAAAAGTGTATCAAGAACAAAACATGCAAAAGGCCGAGAACAATAATGACGACAACAACAATGACAACGACGCCACTGCCACCGGTGAAAATAACGGTAGCTCCATGAATGGTTCGGAGGGAGGTGAAAGGTTGTGCTAA 1191 42.32 MFFHSKTVGGAHSLLQAVIILSTHVTHHHLPTKITKKYSFLTLLYSCVQFLFIHLLISIIYLFVLFLAILISMAQLPPKVPTMAQNWLSYPYNQMMSMPSSAAQPPNWVDEFLDFSSVRRNTHRRSVSDPIAFVESPFIEECGNTNGNCGNNNSVGFERLDDEQFSSMFADDVGTTNVPTSTRSSSNPSTPSDQNSDNDEGKVTLPLDQHKHQQEQQQQQQQQPKNEPGEVEDGSGCQPEMDSAKPCFNFSSDGSTIVDPKRVKRILANRQSAQRSRVRKLQYISELERSVTTLQTEVSALSPRVAFLDHQRLVLNVDNSALKQRIAALAQDKIFKDAHQEALKKEIERLRKVYQEQNMQKAENNNDDNNNDNDATATGENNGSSMNGSEGGERLC 396
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aann4g01046 396 Coils Coil 336 367 - -
Aann4g01046 396 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 264 279 IPR004827 GO:0003700(InterPro)|GO:0006355(InterPro)
Aann4g01046 396 PANTHER BASIC LEUCINE ZIPPER 34 73 374 IPR052483 GO:0003677(PANTHER)|GO:0005634(PANTHER)|GO:0045893(PANTHER)
Aann4g01046 396 MobiDBLite consensus disorder prediction 361 389 - -
Aann4g01046 396 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 259 322 IPR004827 GO:0003700(InterPro)|GO:0006355(InterPro)
Aann4g01046 396 Gene3D - 260 359 - -
Aann4g01046 396 MobiDBLite consensus disorder prediction 171 254 - -
Aann4g01046 396 FunFam Basic leucine zipper 61 260 333 - -
Aann4g01046 396 Pfam bZIP transcription factor 261 306 IPR004827 GO:0003700(InterPro)|GO:0006355(InterPro)
Aann4g01046 396 MobiDBLite consensus disorder prediction 171 202 - -
Aann4g01046 396 MobiDBLite consensus disorder prediction 210 228 - -
Aann4g01046 396 SMART brlzneu 257 321 IPR004827 GO:0003700(InterPro)|GO:0006355(InterPro)
Aann4g01046 396 SUPERFAMILY Leucine zipper domain 261 315 IPR046347 GO:0003700(InterPro)|GO:0006355(InterPro)
Aann4g01046 396 MobiDBLite consensus disorder prediction 361 396 - -
Aann4g01046 396 CDD bZIP-plant-RF2 262 312 IPR044759 GO:0003700(InterPro)|GO:0006355(InterPro)
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aann4g01046 K20557 transcription factor VIP1
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Aann Aann-Chr4:57884658 Aann5g03875 Aann-Chr5:121418471 dispersed
Aann Aann-Chr4:57884658 Aann3g02182 Aann-Chr3:115088178 transposed
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Gene Family Members

Select Gene Event_type S_start S_end Function Ath_gene Identity(%) E-value Score
Aann1g00564 . 121 316 Basic region leucine zipper (bZIP) Transcription Factor gene family AT3G12250 28.692 8.36e-21 88.2
Aann1g00567 . 113 318 Basic region leucine zipper (bZIP) Transcription Factor gene family AT5G06950 24.194 1.81e-16 75.9
Aann1g00761 . 23 128 Basic region leucine zipper (bZIP) Transcription Factor gene family AT4G34590 34.579 4.51e-19 76.6
Aann1g02353 . 114 316 Basic region leucine zipper (bZIP) Transcription Factor gene family AT3G12250 24.242 7.48e-11 59.7
Aann1g02354 . 114 309 Basic region leucine zipper (bZIP) Transcription Factor gene family AT5G06950 25.346 2.18e-11 61.2
Aann1g03015 ACH 211 300 Basic region leucine zipper (bZIP) Transcription Factor gene family AT3G58120 53.333 1.92e-23 97.8
Aann1g03302 ACH 1 392 Basic region leucine zipper (bZIP) Transcription Factor gene family AT1G49720 42.689 7.01e-84 259.0
Aann1g03399 ACH 21 159 Basic region leucine zipper (bZIP) Transcription Factor gene family AT4G34590 47.887 2.71e-35 118.0
Aann1g03996 ACH 125 213 Basic region leucine zipper (bZIP) Transcription Factor gene family AT2G22850 43.82 1.94e-17 73.2
Aann1g04198 ACH 1 302 Basic region leucine zipper (bZIP) Transcription Factor gene family AT4G36730 55.49 1.06e-108 318.0
Aann1g04347 . 118 309 Basic region leucine zipper (bZIP) Transcription Factor gene family AT5G06950 25.701 2.11e-13 67.4
Aann1g04520 ACH 21 416 Basic region leucine zipper (bZIP) Transcription Factor gene family AT1G45249 52.439 1.92e-113 337.0
Aann1g04669 ACH 9 164 Basic region leucine zipper (bZIP) Transcription Factor gene family AT1G75390 48.485 6.84e-45 144.0
Aann1g04931 . 118 239 Basic region leucine zipper (bZIP) Transcription Factor gene family AT5G06960 26.573 9.84e-11 57.4
Aann1g05897 ACH 52 167 Basic region leucine zipper (bZIP) Transcription Factor gene family AT3G30530 68.103 7.82e-49 157.0
Aann1g06388 . 24 265 Basic region leucine zipper (bZIP) Transcription Factor gene family AT5G28770 47.619 7.99e-68 214.0
Aann1g06550 . 58 157 Basic region leucine zipper (bZIP) Transcription Factor gene family AT5G15830 41.0 1.06e-16 70.5
Aann1g06878 ACH 26 367 Basic region leucine zipper (bZIP) Transcription Factor gene family AT2G40620 53.009 3.73e-102 301.0
Aann2g00852 ACH 4 381 Basic region leucine zipper (bZIP) Transcription Factor gene family AT2G46270 48.411 2.54e-96 290.0
Aann2g01052 . 196 243 Basic region leucine zipper (bZIP) Transcription Factor gene family AT1G43700 72.917 4.25e-16 70.9
Aann2g01059 . 95 179 Basic region leucine zipper (bZIP) Transcription Factor gene family AT4G35040 56.471 2.22e-24 93.6
Aann2g01395 . 53 167 Basic region leucine zipper (bZIP) Transcription Factor gene family AT3G30530 65.517 6.06e-43 140.0
Aann2g02233 . 196 296 Basic region leucine zipper (bZIP) Transcription Factor gene family AT5G06839 30.769 2.20e-13 63.2
Aann2g03281 . 625 721 Basic region leucine zipper (bZIP) Transcription Factor gene family AT2G40950 54.128 1.42e-28 106.0
Aann2g04164 ACH 5 164 Basic region leucine zipper (bZIP) Transcription Factor gene family AT1G75390 51.497 5.76e-50 157.0
Aann2g05943 . 125 308 Basic region leucine zipper (bZIP) Transcription Factor gene family AT2G35530 52.105 8.51e-38 145.0
Aann2g05944 . 125 308 Basic region leucine zipper (bZIP) Transcription Factor gene family AT2G35530 51.075 3.70e-37 143.0
Aann3g00343 . 1 330 Basic region leucine zipper (bZIP) Transcription Factor gene family AT3G12250 73.636 4.56e-175 486.0
Aann3g00922 ACH 1 302 Basic region leucine zipper (bZIP) Transcription Factor gene family AT4G36730 54.885 6.89e-109 319.0
Aann3g01051 ACH 5 155 Basic region leucine zipper (bZIP) Transcription Factor gene family AT3G49760 42.5 4.59e-27 98.6
Aann3g01223 ACH 52 167 Basic region leucine zipper (bZIP) Transcription Factor gene family AT3G30530 68.966 1.18e-48 154.0
Aann3g01675 . 13 452 Basic region leucine zipper (bZIP) Transcription Factor gene family AT1G68640 57.531 9.29e-160 458.0
Aann3g02104 . 1 246 Basic region leucine zipper (bZIP) Transcription Factor gene family AT2G16770 54.478 2.09e-89 263.0
Aann3g02182 ACH 54 517 Basic region leucine zipper (bZIP) Transcription Factor gene family AT4G38900 50.734 1.08e-120 362.0
Aann3g02781 . 1 228 Basic region leucine zipper (bZIP) Transcription Factor gene family AT4G35040 65.678 3.52e-106 307.0
Aann3g03388 ACH 24 365 Basic region leucine zipper (bZIP) Transcription Factor gene family AT2G40620 54.335 1.04e-100 298.0
Aann3g04090 ACH 1 367 Basic region leucine zipper (bZIP) Transcription Factor gene family AT2G40620 55.906 2.94e-111 326.0
Aann3g04994 ACH 22 214 Basic region leucine zipper (bZIP) Transcription Factor gene family AT2G22850 35.567 1.87e-27 102.0
Aann3g05965 . 155 218 Basic region leucine zipper (bZIP) Transcription Factor gene family AT1G42990 60.0 9.88e-18 80.1
Aann3g06255 . 63 285 Basic region leucine zipper (bZIP) Transcription Factor gene family AT4G35900 29.911 1.32e-16 73.2
Aann4g00411 ACH 211 300 Basic region leucine zipper (bZIP) Transcription Factor gene family AT3G58120 53.333 3.08e-23 97.1
Aann4g00627 . 1 228 Basic region leucine zipper (bZIP) Transcription Factor gene family AT4G35040 49.345 8.05e-61 190.0
Aann4g01046 . 1 311 Basic region leucine zipper (bZIP) Transcription Factor gene family AT3G58120 56.347 1.44e-98 295.0
Aann4g01080 . 112 217 Basic region leucine zipper (bZIP) Transcription Factor gene family AT5G06960 33.028 1.22e-12 62.8
Aann4g01425 . 296 327 Basic region leucine zipper (bZIP) Transcription Factor gene family AT2G35530 65.625 7.48e-08 47.0
Aann4g01701 ACH 1 392 Basic region leucine zipper (bZIP) Transcription Factor gene family AT1G49720 46.119 8.17e-95 288.0
Aann4g02171 . 114 318 Basic region leucine zipper (bZIP) Transcription Factor gene family AT3G12250 26.214 8.09e-16 72.8
Aann4g02640 ACH 1 381 Basic region leucine zipper (bZIP) Transcription Factor gene family AT2G46270 50.481 1.35e-109 325.0
Aann4g03138 . 30 85 Basic region leucine zipper (bZIP) Transcription Factor gene family AT3G62420 42.857 3.82e-07 42.4
Aann4g03142 . 9 142 Basic region leucine zipper (bZIP) Transcription Factor gene family AT3G62420 57.463 3.17e-52 160.0
Aann4g04864 . 12 297 Basic region leucine zipper (bZIP) Transcription Factor gene family AT3G56850 52.174 8.85e-94 278.0
Aann5g00439 . 16 337 Basic region leucine zipper (bZIP) Transcription Factor gene family AT1G43700 48.673 2.61e-81 248.0
Aann5g03056 ACH 29 372 Basic region leucine zipper (bZIP) Transcription Factor gene family AT2G35530 60.632 4.07e-137 395.0
Aann5g03241 . 215 281 Basic region leucine zipper (bZIP) Transcription Factor gene family AT4G36730 55.224 1.07e-16 72.4
Aann5g03612 ACH 1 553 Basic region leucine zipper (bZIP) Transcription Factor gene family AT4G38900 55.537 5.41e-174 501.0
Aann5g03875 . 1 306 Basic region leucine zipper (bZIP) Transcription Factor gene family AT3G58120 51.976 3.19e-95 283.0
Aann6g01041 . 25 152 Basic region leucine zipper (bZIP) Transcription Factor gene family AT5G11260 74.219 9.34e-59 178.0
Aann6g01764 . 1 481 Basic region leucine zipper (bZIP) Transcription Factor gene family AT1G08320 61.346 0.0 593.0
Aann7g00188 . 21 339 Basic region leucine zipper (bZIP) Transcription Factor gene family AT1G06070 67.941 6.35e-151 432.0
Aann7g01376 . 151 196 Basic region leucine zipper (bZIP) Transcription Factor gene family AT5G24800 65.217 4.32e-14 65.9
Aann7g01459 . 211 293 Basic region leucine zipper (bZIP) Transcription Factor gene family AT3G58120 48.193 5.48e-18 80.9
Aann7g01878 . 164 261 Basic region leucine zipper (bZIP) Transcription Factor gene family AT1G06070 61.616 1.55e-30 110.0
Aann7g02674 . 95 270 Basic region leucine zipper (bZIP) Transcription Factor gene family AT1G03970 45.026 1.74e-39 135.0
Aann7g03923 . 112 210 Basic region leucine zipper (bZIP) Transcription Factor gene family AT5G24800 40.404 1.86e-10 58.9
Aann7g03925 . 62 277 Basic region leucine zipper (bZIP) Transcription Factor gene family AT5G24800 54.113 4.09e-70 214.0
Aann7g04018 ACH 1 388 Basic region leucine zipper (bZIP) Transcription Factor gene family AT2G35530 60.406 1.27e-148 425.0
Aann8g00044 . 41 300 Basic region leucine zipper (bZIP) Transcription Factor gene family AT3G58120 30.545 4.97e-25 102.0
Aann8g02165 . 21 416 Basic region leucine zipper (bZIP) Transcription Factor gene family AT5G06839 57.589 1.26e-172 492.0
Aann8g02332 . 1 297 Basic region leucine zipper (bZIP) Transcription Factor gene family AT3G56850 49.85 6.27e-87 260.0
Aann8g02639 . 29 337 Basic region leucine zipper (bZIP) Transcription Factor gene family AT1G43700 40.881 2.91e-61 194.0
Aann9g01016 ACH 21 416 Basic region leucine zipper (bZIP) Transcription Factor gene family AT1G45249 53.333 5.46e-117 346.0
Aann9g01259 ACH 11 171 Basic region leucine zipper (bZIP) Transcription Factor gene family AT1G75390 46.784 1.31e-35 120.0
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Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
Aann bZIP_1 1.5e-09 CL0018 TF bZIP