Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Aann4g01066 | ATGGGTGATGAAAAAGAAGTTATAAAAAATGATGAGAAAACTGAAAAGGGTTTAAAGAGTAAGAAGAAGAAAAAGGGTATTTTGGGAAGGATTTGGGGTAGTTTGTTTAGGTTGGGTAGTGGTGATGATTTTGAGAAAAGGTTGCAATATATAACTAAAGAGGAAGGGAGTATTGTTATGAGGATGAAGAGGCGGGCTATGCGCTGGAGGAGGACTGCGCGTAATTTGATTATATTTTCGGTTCTTATTGAGTTGGTTGCAATTGGTTATGCTATAATGACAACAAGAACTGTGTACATGGAGTGGAGAATGAGATCATTGCGTGTCTTACCAATGTTTCTTTTCCCCGCACTATCATTCGCTTTGTATTATGGACTTCAGAGCTTCACTAAGTTTTGTGATCGCAGGGATCAGAAAACATTAGAGAAGCTTAGGGCTGAAAGGCAAGCAAAAATTGATGAACTTAAGGAAAGGACTAATTACTACATCACTCAGCAACTCATTCAGAAATATGACCCTGACCCAGCAGCAAAAGCAGCTGCTGCATCTGTCCTTGCATCCAAATTGGGCGCGGATTCAGGCCTAAAAGTGTTTCTTGGGGACGAATCACAACAGAATCCATACGCCACAGGGAAGAGCGGTGATGCTGAGCTTCAACAATCCACTGGTCTTCGTAAACGAAATCAATCGAATACTAGATCTTCTGGAAGCAATGCAGGCCAACAATCCGCTAAAGAAGTGGCTCAATATGAAGAAAATGAGGTTTCTGAGAATTCACCACACGGGCAGCTTGTTGTTAATCATCATAATGCTACATCTTTAGGTGCTCAAGATGGTGGTTGGATTGCTCGAATTGCTGCATTGCTTGTGGGAGAGGACCCCACACAATCGTACGCCCTCATATGTGGCAATTGCCATATGCATAATGGTCTTGCAAGAAAAGAGGAATTCCCCTTCATCACTTACTATTGTCCCCATTGCAATGCTCTGAATAAACCAAAGGACTCAGTGCTACCTTCAAATATAATGTCTCCTGTTTCGGGATCTTCACCGGTAGCAAGTGCAGGTGCTAATTTGATTGAACAAAATAAGGAGTCAAAAGTTGAGAAAGAATCTGCTGCTAGCATTCCCGTGGCCGATGTGGTGGAAGAGAAAGAAGCAACTGAAAGTAAACTGACTGAGGATCCTTCTAGTCATTAG | 1200 | 42.0 | MGDEKEVIKNDEKTEKGLKSKKKKKGILGRIWGSLFRLGSGDDFEKRLQYITKEEGSIVMRMKRRAMRWRRTARNLIIFSVLIELVAIGYAIMTTRTVYMEWRMRSLRVLPMFLFPALSFALYYGLQSFTKFCDRRDQKTLEKLRAERQAKIDELKERTNYYITQQLIQKYDPDPAAKAAAASVLASKLGADSGLKVFLGDESQQNPYATGKSGDAELQQSTGLRKRNQSNTRSSGSNAGQQSAKEVAQYEENEVSENSPHGQLVVNHHNATSLGAQDGGWIARIAALLVGEDPTQSYALICGNCHMHNGLARKEEFPFITYYCPHCNALNKPKDSVLPSNIMSPVSGSSPVASAGANLIEQNKESKVEKESAASIPVADVVEEKEATESKLTEDPSSH | 399 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Aann4g01066 | 399 | Pfam | Predicted integral membrane zinc-ribbon metal-binding protein | 281 | 331 | IPR019273 | - | |
| Aann4g01066 | 399 | PANTHER | ENDOPLASMIC RETICULUM JUNCTION FORMATION PROTEIN LUNAPARK | 21 | 384 | IPR040115 | GO:0071782(PANTHER)|GO:0071786(InterPro)|GO:0071786(PANTHER) | |
| Aann4g01066 | 399 | MobiDBLite | consensus disorder prediction | 382 | 399 | - | - | |
| Aann4g01066 | 399 | MobiDBLite | consensus disorder prediction | 363 | 399 | - | - | |
| Aann4g01066 | 399 | Coils | Coil | 138 | 158 | - | - | |
| Aann4g01066 | 399 | MobiDBLite | consensus disorder prediction | 206 | 259 | - | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Aann4g01066 | K23292 | endoplasmic reticulum junction formation protein lunapark |
| Select | Gene_1 | Gene_2 | Event_name |
|---|---|---|---|
| 329 | Aann1g02376 | Aann4g01066 | |
| 1627 | Aann2g03950 | Aann4g01066 |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Aann | Aann-Chr1:72649581 | Aann4g01066 | Aann-Chr4:58753272 | wgd | |
| Aann | Aann-Chr2:108403160 | Aann4g01066 | Aann-Chr4:58753272 | wgd |