AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

leaf

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aann4g01094 ATGGGGGATATTGAAACCCTAGGGATCCTTGATGAAATTCAATCACTCATTTCCGATAAGCTTCAAGTGGTTTCTTACAAGTGGCTGAGTAGGAACTTTTTGGTGCCATCAAATACTGCGAAGAGGTTGCTTCAAGAGTTTGTGGAAAAGAATGGAACTCAAGTCAAAGTTGTATATTCTCTGTCTGGATGGTTGAAGAACAATCCAGAAGCTTACCATGTTAAGCTTGTACTGGGTTCGAAACTTTCAGAAGCCAAAGAAGATTTTGGTGACGGGTGCTCAGTTCAAGTCTATAGTGTCCAAGCGAGTGTTCCCAAGGATCCAGCCGTACTTTGGAATGCTGAATTTATACAATCAGAAGAGCTCTTTAAGGAGGCCCCTAATGTTGATAATTGCTTGCGGGATAACAGGTTTTGTGGGGTTTCAAATTCATTTGTAAAGCGCAACACAGAGGGAACACCTGGAACCAGCACAGGTCCATCCTTAAAAAATGTAGGAATCCCTGGACCGTCGAGATCTAATATTTCTAATCAAACTTCGAACTCTTCACTTCATCAAGAGAAAAAGGTCGACTTGCCGGATCTTAAGCCTGATCAGGGGAAAATTATTCAAAGTGGAAATCATAAAGAACAAGTTCCTCAATTTCCAAATAACAAAAAGAAAGCACAGAATGATAAAAGCTCTTCTGGGACTGCAAGCATGTTAGCTAGTATGTGGGGTCGCGCGTCTGCAAAACCAAAGCCCGAGCCAGCTTCAGTAAAAGCTGATAACATTGCTCCTATTTCCAATGACGCTCAATTGCGTGCTAATGAACTGGTAGAGGATGAAAGCAGTGACGATGATGCCCGGGAAATGAACTTTAAGAGAGGATCAAATGGTGAAGGGAATAATCGAAAGAGGCGTGTGGTCCTTGATGACTCTGATGAAGATGATGATGATGGCAAATATGTAGTGAACCTAGCTTCACCAGATCCTCCGAAAAAGCAAGTATCTGTTGATTTAAAGAAAAGTTCTAGAACTTCAGATTTGGAAAATAAGAATTTGGTTTTTGATGAACCAAAAGAAGAGAATGTGAAGGTTAAGAAAGAAAAGATGCCTGAGAAAGAAGATAGCCACGTCAGGAAAATGGAGAATCCGCCTTCAAACGAGAACAAATGTCCTGAAAAGAATGATGCTACGAAAGATAAAGCGGGTGATGCTGCTCAAAATGCGCTTAAAAAGAGAAAAGTTTTGAAGACACGGATCGATGAGCGTGGGAGAGAAGTAACTGAGGTGGTTTGGGAGGACGATGAGAAAGAAACGAAGCCTGATGATAATACAAGAAATGATAAATGTGACACTAATACTGCAAACAATGTTGTCAACAGGCCCCCCGCAGCAGCTCCTAAAAAGTCACCTGCAGTAGGTAATGCTCCGTCACATGCAACAGGCAAAGCAGGAAACAAGAAAGCCGCTGCGAAGGATCCTAAACAGGGGAATATCATGTCATTCTTCAAGAAGAAGGTTTAA 1509 41.75 MGDIETLGILDEIQSLISDKLQVVSYKWLSRNFLVPSNTAKRLLQEFVEKNGTQVKVVYSLSGWLKNNPEAYHVKLVLGSKLSEAKEDFGDGCSVQVYSVQASVPKDPAVLWNAEFIQSEELFKEAPNVDNCLRDNRFCGVSNSFVKRNTEGTPGTSTGPSLKNVGIPGPSRSNISNQTSNSSLHQEKKVDLPDLKPDQGKIIQSGNHKEQVPQFPNNKKKAQNDKSSSGTASMLASMWGRASAKPKPEPASVKADNIAPISNDAQLRANELVEDESSDDDAREMNFKRGSNGEGNNRKRRVVLDDSDEDDDDGKYVVNLASPDPPKKQVSVDLKKSSRTSDLENKNLVFDEPKEENVKVKKEKMPEKEDSHVRKMENPPSNENKCPEKNDATKDKAGDAAQNALKKRKVLKTRIDERGREVTEVVWEDDEKETKPDDNTRNDKCDTNTANNVVNRPPAAAPKKSPAVGNAPSHATGKAGNKKAAAKDPKQGNIMSFFKKKV 502
leaf

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aann4g01094 502 Pfam DNA polymerase subunit Cdc27 23 501 IPR019038 GO:0005634(InterPro)|GO:0006260(InterPro)|GO:0043625(InterPro)
Aann4g01094 502 Gene3D DNA polymerase delta, p66 (Cdc27) subunit, wHTH domain 7 147 IPR041913 -
Aann4g01094 502 FunFam DNA polymerase delta subunit 7 149 - -
Aann4g01094 502 MobiDBLite consensus disorder prediction 281 306 - -
Aann4g01094 502 PANTHER DNA POLYMERASE DELTA SUBUNIT 3 1 501 IPR019038 GO:0003887(PANTHER)|GO:0005634(InterPro)|GO:0006260(InterPro)|GO:0006271(PANTHER)|GO:0006297(PANTHER)|GO:0043625(PANTHER)|GO:0043625(InterPro)|GO:1904161(PANTHER)
Aann4g01094 502 MobiDBLite consensus disorder prediction 426 502 - -
Aann4g01094 502 MobiDBLite consensus disorder prediction 329 405 - -
Aann4g01094 502 MobiDBLite consensus disorder prediction 145 405 - -
Aann4g01094 502 MobiDBLite consensus disorder prediction 145 186 - -
Aann4g01094 502 MobiDBLite consensus disorder prediction 204 236 - -
Aann4g01094 502 MobiDBLite consensus disorder prediction 426 444 - -
leaf

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aann4g01094 K03504 DNA polymerase delta subunit 3