Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Aann4g01106 | ATGGGGCTGAATGTATATAGCAAAACCCATGTATTATTCGCGATTATTGGTCTTGTGTCGATATTAGTCGATGTCGATGCAAGTGCAAGCAAATGCGATTTGTTTCAAGGAAATTGGGTGTTGGATAAGACGTATCCACTCTACAACGAGTCGACTTGCCCGTTCTTAGAGAAAGAGTTTAATTGTGTTAATAATGGCCGCCCTGATCGTTTTTATCTTAAATATCGATGGCAGCCCCGTGGCTGCCACTTATCCAGATTTGATGGTCAAAACTTCTTAGAAAAACTAAGAGGGAAAACCATAATGTTTGTAGGAGATTCACTTAGCCGAAATCAATGGTTGTCGATGCTATGCATAATCCACTCATCGATGCCAAAGGCAAATTATGCCGTAAACATCTCACTGGTTAAAGATATGACCACATACACCTTCACGGATTACAACATGCAAGTGACATACCACCACAATCTATACCTAGTGGACATAGTGAAGCAACGATTTGGGAGAGTGTTGAAGTTGGATGTATTGACAGCCGGAAAGCTGTGGTTGGATGTTGACTACCTCGTATTCAACACGTGGCATTGGTGGAATCGTAGAGGAGCCAGCCAACCATTTGATTATATACAAGATGGAAGTCGTATCTACAAGGACATGGACCGTGTCGTTGCTTTTGGGAAGGCCGTTGTTACATGGGGTAAATGGGTTGATGCTAATGTCACTCAGAACAAAACAAAAGTGTTTTTTCAAGGGATATCACCATCTCATTACAATGGCACTGATTGGGGAGAACCAAAGGCAAAATCCTGCTCTGGACAGAAAAGTCCTCTACTAGCTTCCAAATATCCCGGTGTCTCACCACCTGCTTTGGCTGTCCTCAAAAGCTCACTCAAAACAATCAAGAAACCAGTCACTTTGCTCGATATAACTAACCTTTCTTTGCTCCGGAAAGATGGGCACCCGTCATCTTACGGGTTAGGTGCGGTGGATTGCAGCCACTGGTGCCTAGCAGGGGTTCCAGATACTTGGAATGTCTTGCTATACAATCTTATGTTTTGA | 1056 | 43.18 | MGLNVYSKTHVLFAIIGLVSILVDVDASASKCDLFQGNWVLDKTYPLYNESTCPFLEKEFNCVNNGRPDRFYLKYRWQPRGCHLSRFDGQNFLEKLRGKTIMFVGDSLSRNQWLSMLCIIHSSMPKANYAVNISLVKDMTTYTFTDYNMQVTYHHNLYLVDIVKQRFGRVLKLDVLTAGKLWLDVDYLVFNTWHWWNRRGASQPFDYIQDGSRIYKDMDRVVAFGKAVVTWGKWVDANVTQNKTKVFFQGISPSHYNGTDWGEPKAKSCSGQKSPLLASKYPGVSPPALAVLKSSLKTIKKPVTLLDITNLSLLRKDGHPSSYGLGAVDCSHWCLAGVPDTWNVLLYNLMF | 351 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Aann4g01106 | 351 | Pfam | PMR5 N terminal Domain | 31 | 83 | IPR025846 | - | |
| Aann4g01106 | 351 | PANTHER | PROTEIN TRICHOME BIREFRINGENCE-LIKE 9-RELATED | 22 | 349 | IPR029962 | GO:0005794(PANTHER)|GO:0016413(InterPro)|GO:0016413(PANTHER) | |
| Aann4g01106 | 351 | Pfam | GDSL-SGNH-like Acyl-Esterase family found in Pmr5 and Cas1p | 84 | 348 | IPR026057 | GO:0016740(InterPro) |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Aann4g01106 | K23877 | xyloglucan O-acetyltransferase |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Aann | Aann-Chr4:60105629 | Aann5g03924 | Aann-Chr5:122478119 | dispersed | |
| Aann | Aann-Chr5:15337680 | Aann4g01106 | Aann-Chr4:60105629 | transposed | |
| Aann | Aann-Chr1:72092987 | Aann4g01106 | Aann-Chr4:60105629 | wgd | |
| Aann | Aann-Chr2:108894765 | Aann4g01106 | Aann-Chr4:60105629 | wgd |