AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aann4g01157 ATGGGGAATAAATTGGGTAGAAGGAGACAAATAGTTGATGAAAAGTATACAAAGCCACAAGGGTTGTATCAACATAAAGATGTTGATCATAAGAAGCTTAGGAAGCTTATACTTGATGCGAAACTAGCTCCATGTTATCCCGGTGATGATGATTGTAGTTGTGATCTTGAAGAATGTCCAATTTGTTTCTTGTATTATCCAAGTTTGAATAGATCAAGATGTTGCACGAAAGGCATTTGCACCGAGTGTTTTCTCCAAATGAAGACACCGAATTCTACACGGCCTACGCAATGTCCGTTTTGTAAAACGTTGAATTACGCCGTGGAGTATAGAGGCGTGAAGAGTAAAGAGGAAAAGGGGCAGGAGCAAATTGAAGAACAAAGGGTGATAGAAGCAAAAATAAGAATGAGACAACAAGAAATTCTAGATGAAGAGGAAAGAATGATAAAAAGGCAAGAGATGAGCTCTTCTAGCGGCATAATTGAACCAAACGAGACTGAATATTTCTCCAGAGCAGCAGCATCTTCTTCTGAAAGTGAGGAAATTGTGTCTGCTCCACAGCCAAGTGGCTCAGAAATTCGACATTCTCTGCGCTCTAGGGAGAACAGAGATGATGAATTTGACCTTGATCCTGAGAACATAATGCTTATGGAAGCCATCTGGTTGTCCTATCAGGAGGATAACAAGCACCAACACCATAACCCAAACTATGGCGACGCTGCGCAACTAGCAAAATATGCAACAGAAGTTCGTGTATTAGCATCCATGGCTCCGCAATCTGAAATGGCATCAGCATCTTCATCCTCATCACCTTCTGGAGGTCTAGCATGCGCTATAGCCGCACTAGCCGAACGCCAACAAACGGGAGCAGAATCATCAACTAATTACAACAACTATGGCGTTAATACCTCAACATACAACATACATCCCGACCATAGCTCAACAGGGTTGTCACTTAATAACCATCTACAAATAAGCAGACAAGAACATGAATCATGGGGTGAAAATGTAGTTGAACCTGAAACTGGTTTTGGGTATGATCATTATGAAGATGTCCACAGAGGAGGACAGTACGTGCAACAAGATGAGAATATAGTTCCTGAAAGCTTTGAAGAGCAGATGATGTTAGCCATGGCGGTTTCGTTGGCAGAGGCTCGAGCTAGGACTAGTAGTAGTACACCAGAAGTTGCTTGGATTTAG 1200 42.08 MGNKLGRRRQIVDEKYTKPQGLYQHKDVDHKKLRKLILDAKLAPCYPGDDDCSCDLEECPICFLYYPSLNRSRCCTKGICTECFLQMKTPNSTRPTQCPFCKTLNYAVEYRGVKSKEEKGQEQIEEQRVIEAKIRMRQQEILDEEERMIKRQEMSSSSGIIEPNETEYFSRAAASSSESEEIVSAPQPSGSEIRHSLRSRENRDDEFDLDPENIMLMEAIWLSYQEDNKHQHHNPNYGDAAQLAKYATEVRVLASMAPQSEMASASSSSSPSGGLACAIAALAERQQTGAESSTNYNNYGVNTSTYNIHPDHSSTGLSLNNHLQISRQEHESWGENVVEPETGFGYDHYEDVHRGGQYVQQDENIVPESFEEQMMLAMAVSLAEARARTSSSTPEVAWI 399
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aann4g01157 399 PANTHER PROTEIN SIP5 1 297 IPR039301 GO:0005737(PANTHER)
Aann4g01157 399 MobiDBLite consensus disorder prediction 170 206 - -
Aann4g01157 399 ProSiteProfiles Zinc finger RING-type profile. 59 102 IPR001841 -
Aann4g01157 399 MobiDBLite consensus disorder prediction 170 193 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aann4g01157 - -
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Event-related genes

Select Gene_1 Gene_2 Event_name
1656 Aann2g04130 Aann4g01157
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Aann Aann-Chr2:115342284 Aann4g01157 Aann-Chr4:61728480 wgd