Gene detail

Gene Search

Species

Gene ID

Example:

Or, Query Sequence

Example:

Gene details

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Aann4g01165	ATGGCAACTTCTTCAAACTACACTCATGCTTTTACAAACAATAACCCAAGAACCAAATTCCTAACATCTTCTAAAGATGTATTTGGTTCATCTCCAGTTTCAGTAACAGTTAAAAAACAGAGCAACCAAACTCGTCAAAATTCGATACGTTCGGCACTTCAAACGCCCTCAATTCTTCAAGTACCGAAACAAACACCGCGAAAAAGCTCGAAAAGTATCGAATTACCTTCTTTAAGTCCATCTCCAAAAGTCCCACAAAATTGGAACTTTTTGCAAAAGCTTGCTTCGATCGCATTGGACGCGATCGAAGACCGAATTAAAGATAACGAAAAATTACACCCTTTACCGAAAACAGTCGACCCAGATGTTCAGATCGCCGGAAATTTCTCTCCGGTGCCGGAGCAGCCAGTGAGGCATTCTTTACCGGTGGCCGGGAAAATACCGGAGCATTTTAACGGTGTTTATTTACGTAACGGAGCAAACCCATTATTCGAACCAACTTCCGGGCATCATTTGTTTGACGGAGATGGCATGATTTATGCTGTAAAATTCGATAATGGGTCGGCAAGTTACGCGTGCAGACACACGGAAACTCACCGACTCGTACAAGAACGCGCTATCGGAAAGCCGGTTTTCCCCAAAGCTATTGGGGAACTACACGGGCATTCTGGTATCGCGAAATTGTTGTTGTTTTACGCACGTGGATTGTGCGGGTTAGTCGATCACAACAATGGCATTGGCGTAGCTAACGCCGGTTTAGTTTATTTTAACAACCGGCTGTTAGCTATGTCAGAAGATGATTTACCTTATCATGTCAGAGTTACACCTTCTGGCGATTTGAAAACCGCTGGAAGGTATAACTTTGATGGACAGCTGGAGTCTGCTATGATAGCTCACCCGAAACTGGACCCAGTTTCGGGTGAACTGTTTGCATTAAGTTATGATGTTATTAAAAAGCCATATTTGAAATATTTTTGGTTTTCACCCGATGGGAAGAAGTCTGATGACGTAGAGATTGATTTGGAGAAACCGACAATGGTTCATGATTTCGCGATAACTGAAAACTACGTGGTGGTCCCAGACCATCAAGTAGTTTTCAAGATGTCCGAAATGGTGACGGGTGGGTCACCCGTTGTATACGACAAAGAAAAAGTATCCCGGTTTGGTGTTTTGGACAAATATGCCAAAAATGGGTCGGGGATCAAATGGGTCGAGGTTCCGGATTGTTTTTGTTTTCATTTGTGGAATGCGTGGGAAGAGCCTGAGTCGGATGAAGTTGTGGTAATCGGGTCGTGTATGACTCCAGCTGACTCGATTTTTAACGAATGTAACGAAGAGTTAAAAAGTGTTTTATCTGAAATTCGACTTAACTTAAAAACTGGAAAATCAACACGCCGAGCAATCATTTCACCAGAAAACGATGTTAACTTAGAAGCTGGAATGGTGAACAAAAATCTTTTAGGCCGAAAAAGTAAATACGCTTATCTAGCGATTGCTGAACCATGGCCTAAAGTGTCGGGTTTTGCTAAAGTTGATCTTTCAACAGGGGAGACTAAGAAGTTTATTTATGGAGACGAAAAGTATGGTGGCGAGCCGTTGTATCTACCTAGAGACAATGCAAGTGACGAAGACGATGGTCATATTTTGGCCTTTGTGCACGACGAAAAAACATGGAAGTCCGAACTCCAGATTGTGAATGCAAAGACAATGGAATTAGAGGCGACAGTTATGTTACCATCGAGGGTTCCTTATGGTTTTCATGGAACTTTTATTCCAGCCCGTGATTTAGCATCGCAGGCGTGA	1803	42.71	MATSSNYTHAFTNNNPRTKFLTSSKDVFGSSPVSVTVKKQSNQTRQNSIRSALQTPSILQVPKQTPRKSSKSIELPSLSPSPKVPQNWNFLQKLASIALDAIEDRIKDNEKLHPLPKTVDPDVQIAGNFSPVPEQPVRHSLPVAGKIPEHFNGVYLRNGANPLFEPTSGHHLFDGDGMIYAVKFDNGSASYACRHTETHRLVQERAIGKPVFPKAIGELHGHSGIAKLLLFYARGLCGLVDHNNGIGVANAGLVYFNNRLLAMSEDDLPYHVRVTPSGDLKTAGRYNFDGQLESAMIAHPKLDPVSGELFALSYDVIKKPYLKYFWFSPDGKKSDDVEIDLEKPTMVHDFAITENYVVVPDHQVVFKMSEMVTGGSPVVYDKEKVSRFGVLDKYAKNGSGIKWVEVPDCFCFHLWNAWEEPESDEVVVIGSCMTPADSIFNECNEELKSVLSEIRLNLKTGKSTRRAIISPENDVNLEAGMVNKNLLGRKSKYAYLAIAEPWPKVSGFAKVDLSTGETKKFIYGDEKYGGEPLYLPRDNASDEDDGHILAFVHDEKTWKSELQIVNAKTMELEATVMLPSRVPYGFHGTFIPARDLASQA	600

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Aann4g01165	600	PANTHER	BETA-CAROTENE DIOXYGENASE	111	592	IPR004294	GO:0009570(PANTHER)\|GO:0010436(PANTHER)\|GO:0016121(PANTHER)\|GO:0016702(InterPro)
	Aann4g01165	600	MobiDBLite	consensus disorder prediction	1	80	-	-
	Aann4g01165	600	Pfam	Retinal pigment epithelial membrane protein	134	592	IPR004294	GO:0016702(InterPro)

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Aann4g01165	K09840	9-cis-epoxycarotenoid dioxygenase [EC:1.13.11.51]

Event-related genes

Select	Gene_1	Gene_2	Event_name
	303	Aann1g02283	Aann4g01165
	1654	Aann2g04127	Aann4g01165

Duplication type information

Select	Gene1	Location1	Gene2	Location2	Duplicated-type
	Aann	Aann-Chr4:62125757	Aann4g02308	Aann-Chr4:87976701	dispersed
	Aann	Aann-Chr6:53063893	Aann4g01165	Aann-Chr4:62125757	transposed
	Aann	Aann-Chr1:71728627	Aann4g01165	Aann-Chr4:62125757	wgd
	Aann	Aann-Chr2:115088908	Aann4g01165	Aann-Chr4:62125757	wgd