AGRP
Asteraceae Genomic Research Platform
Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Aann4g01175 | ATGGAAGACGAACACTACACCACCCTCTCAAACCAAGGCTCGGATCTCGATTTCAGCTTTACGAGCTCCACTACCAATTCCATCGCCACAACGAGCGCCCGCTCTAGCCTCGCTCGATCAAGTCTAAGCCTCAGCTTCAACGAATCAACTCGAATATCCTCAGTCTCCACCACCACCTCCTCAACCGAAATCCCAAACTATCATAGTCGCCCTCACCGCAAATCTGACCCAAACTGGTCTGCTATCAAAGCAGCCACTAACCTCTCAGATGATGGGAAACTCCACATGCGCCACCTTAAACTCGTCCGCCACGTAGGATCTGGCAACCTAGGCCGAGTATTCCTGTGCAAACTTCGCGATTACAATCACGCGAATTTTGCATTAAAAGTTGTCGACAACAACTTACTGACCTCCAAAAAGTGGTCACATGTACAAACAGAAGCGCGGATCCTGTCCGCGCTAGACCACCCCTTCCTCCCTACACTCTACGCCCATTTTGAAGCATCTCATTACACGTGCTTCTTAATAGATTACTGCCCTAATGGAGACTTGCATTCCTTGCTACGCAAGCAACCAAAATATCGTTTTCATATCGACTCTATCCGCTTTTTCGCAGCTGAAGTACTAGTAGCTCTCGAATATCTTCATTCCCTAGGTATCGTATACCGTGATTTAAAACCCGAGAACATTTTAATACGAGAAGATGGTCATATCATGCTATCTGATTTCGACTTATGTTTCAACGCTGATGTTACACCTAAAGTTGATACTTTACGAAAACTTAACGGTACGTTAACTGAGTTCGTATCCGAACCAACAACCGCGTTTTCGAAGTCGTGCGTTGGTACACATGAGTATTTAGCACCAGAGTTAGTTAACGGTAATGGTCACGGTAACGGTGTAGACTGGTGGGCATTTGGTGTATTAATATACGAGTTATTAAATGGTACTACACCGTTTAGAGGAAATAGTAAAGAGTCCACCCTGCGCAATATAACAACAAAAAAGGTGCATTTCAAAGAAGATGTTACAAATAATACTAGTACGGCGCATGTTCAGGATTTGATAACAAAGTTGCTAGTGAAAGATCCTAAGGAGAGGCTAGGATGCGCGAGGGGTGCAACCGATATTAAACAGCACCCCTTTTTTAACGGCCTTAAGTGGCCGTTAATTCGTAACTATCAACCACAAGAGGTTAAGGGGTTGATACTTAGGAAGATTAGTATTTCACGTGCTAGTCATGTGGGTGGGTGGCCATTGTTGCATCAGAAAAGGCGTTGGTTATGGAAAGGGTTGAATTGTATTTTGTTGAAAAGTAAGGGGTCTAAACATAACTTGAATGTTAATCAGAATTGTTACCATTATAAACATAGTATTAAAGAGTAA | 1386 | 43.43 | MEDEHYTTLSNQGSDLDFSFTSSTTNSIATTSARSSLARSSLSLSFNESTRISSVSTTTSSTEIPNYHSRPHRKSDPNWSAIKAATNLSDDGKLHMRHLKLVRHVGSGNLGRVFLCKLRDYNHANFALKVVDNNLLTSKKWSHVQTEARILSALDHPFLPTLYAHFEASHYTCFLIDYCPNGDLHSLLRKQPKYRFHIDSIRFFAAEVLVALEYLHSLGIVYRDLKPENILIREDGHIMLSDFDLCFNADVTPKVDTLRKLNGTLTEFVSEPTTAFSKSCVGTHEYLAPELVNGNGHGNGVDWWAFGVLIYELLNGTTPFRGNSKESTLRNITTKKVHFKEDVTNNTSTAHVQDLITKLLVKDPKERLGCARGATDIKQHPFFNGLKWPLIRNYQPQEVKGLILRKISISRASHVGGWPLLHQKRRWLWKGLNCILLKSKGSKHNLNVNQNCYHYKHSIKE | 461 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Aann4g01175 | 461 | Pfam | Protein kinase domain | 101 | 383 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
| Aann4g01175 | 461 | MobiDBLite | consensus disorder prediction | 55 | 78 | - | - | |
| Aann4g01175 | 461 | ProSitePatterns | Serine-Threonine protein kinases active-site signature. | 220 | 232 | IPR008271 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
| Aann4g01175 | 461 | Gene3D | Transferase(Phosphotransferase) domain 1 | 183 | 393 | - | - | |
| Aann4g01175 | 461 | FunFam | Serine-threonine-protein kinase OXI1 | 275 | 401 | - | - | |
| Aann4g01175 | 461 | Gene3D | Phosphorylase Kinase; domain 1 | 98 | 182 | - | - | |
| Aann4g01175 | 461 | ProSiteProfiles | Protein kinase domain profile. | 99 | 383 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
| Aann4g01175 | 461 | SUPERFAMILY | Protein kinase-like (PK-like) | 77 | 398 | IPR011009 | - | |
| Aann4g01175 | 461 | SMART | serkin-6 | 99 | 383 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
| Aann4g01175 | 461 | CDD | STKc-phototropin-like | 97 | 399 | - | - | |
| Aann4g01175 | 461 | FunFam | Serine-threonine-protein kinase OXI1 | 183 | 251 | - | - | |
| Aann4g01175 | 461 | PANTHER | FLIPPASE KINASE 1-RELATED | 28 | 401 | - | GO:0004674(PANTHER)|GO:0005634(PANTHER)|GO:0005737(PANTHER)|GO:0005886(PANTHER)|GO:0006468(PANTHER) |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Aann4g01175 | - | - |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Aann | Aann-Chr4:62794722 | Aann4g02331 | Aann-Chr4:88228168 | dispersed | |
| Aann | Aann-Chr2:114534778 | Aann4g01175 | Aann-Chr4:62794722 | wgd |
| Select | Gene | Event_type | S_start | S_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|---|
| Aann1g00896 | . | 1 | 934 | AGC Kinase gene family | AT3G52890 | 48.52 | 0.0 | 733.0 | |
| Aann1g04522 | . | 10 | 504 | AGC Kinase gene family | AT5G09890 | 76.768 | 0.0 | 814.0 | |
| Aann1g04933 | . | 25 | 459 | AGC Kinase gene family | AT3G08720 | 56.484 | 0.0 | 515.0 | |
| Aann1g06540 | . | 110 | 555 | AGC Kinase gene family | AT1G79250 | 71.903 | 0.0 | 651.0 | |
| Aann2g02808 | . | 9 | 525 | AGC Kinase gene family | AT2G26700 | 58.757 | 0.0 | 577.0 | |
| Aann2g03377 | . | 8 | 518 | AGC Kinase gene family | AT4G33080 | 78.752 | 0.0 | 832.0 | |
| Aann2g04110 | . | 1 | 471 | AGC Kinase gene family | AT1G53700 | 61.856 | 0.0 | 532.0 | |
| Aann2g04712 | . | 1 | 996 | AGC Kinase gene family | AT3G45780 | 68.396 | 0.0 | 1379.0 | |
| Aann3g00362 | . | 1 | 934 | AGC Kinase gene family | AT3G52890 | 46.786 | 0.0 | 691.0 | |
| Aann3g00422 | . | 53 | 910 | AGC Kinase gene family | AT5G58140 | 71.094 | 0.0 | 1273.0 | |
| Aann3g01550 | . | 79 | 578 | AGC Kinase gene family | AT3G27580 | 68.872 | 0.0 | 682.0 | |
| Aann3g02914 | . | 98 | 1288 | AGC Kinase gene family | AT3G17850 | 64.38 | 0.0 | 1467.0 | |
| Aann3g03255 | . | 30 | 1166 | AGC Kinase gene family | AT5G62310 | 59.091 | 0.0 | 1294.0 | |
| Aann3g03368 | . | 1 | 465 | AGC Kinase gene family | AT3G08720 | 69.492 | 0.0 | 645.0 | |
| Aann3g03962 | . | 31 | 1164 | AGC Kinase gene family | AT5G62310 | 55.824 | 0.0 | 1222.0 | |
| Aann3g04790 | . | 71 | 451 | AGC Kinase gene family | AT3G44610 | 58.486 | 4.20e-154 | 444.0 | |
| Aann3g05347 | . | 70 | 499 | AGC Kinase gene family | AT5G40030 | 77.397 | 0.0 | 706.0 | |
| Aann3g05438 | . | 86 | 578 | AGC Kinase gene family | AT3G27580 | 65.863 | 0.0 | 636.0 | |
| Aann3g05592 | . | 3 | 451 | AGC Kinase gene family | AT3G44610 | 67.108 | 0.0 | 575.0 | |
| Aann3g05593 | . | 465 | 902 | AGC Kinase gene family | AT3G52890 | 62.585 | 0.0 | 563.0 | |
| Aann3g05748 | . | 13 | 385 | AGC Kinase gene family | AT1G51170 | 56.836 | 2.68e-144 | 412.0 | |
| Aann4g01175 | . | 11 | 469 | AGC Kinase gene family | AT3G14370 | 57.053 | 2.88e-178 | 506.0 | |
| Aann4g02331 | . | 22 | 438 | AGC Kinase gene family | AT2G34650 | 59.424 | 0.0 | 514.0 | |
| Aann4g03085 | ACH | 73 | 765 | AGC Kinase gene family | AT2G44830 | 66.245 | 0.0 | 847.0 | |
| Aann4g04641 | . | 8 | 396 | AGC Kinase gene family | AT3G25250 | 58.543 | 5.63e-161 | 457.0 | |
| Aann5g00058 | . | 1 | 464 | AGC Kinase gene family | AT3G08720 | 68.79 | 0.0 | 656.0 | |
| Aann5g00621 | . | 73 | 586 | AGC Kinase gene family | AT5G47750 | 77.586 | 0.0 | 789.0 | |
| Aann5g00622 | . | 295 | 586 | AGC Kinase gene family | AT5G47750 | 77.517 | 1.65e-169 | 481.0 | |
| Aann5g01693 | . | 10 | 1009 | AGC Kinase gene family | AT1G45160 | 49.472 | 0.0 | 891.0 | |
| Aann5g01977 | . | 135 | 429 | AGC Kinase gene family | AT3G08720 | 35.906 | 3.26e-45 | 169.0 | |
| Aann5g02469 | . | 1 | 464 | AGC Kinase gene family | AT3G08720 | 68.79 | 0.0 | 656.0 | |
| Aann5g02507 | . | 923 | 961 | AGC Kinase gene family | AT1G48490 | 51.282 | 1.63e-07 | 45.1 | |
| Aann5g02887 | . | 196 | 468 | AGC Kinase gene family | AT4G14350 | 86.447 | 0.0 | 520.0 | |
| Aann5g02888 | . | 148 | 187 | AGC Kinase gene family | AT3G23310 | 100.0 | 2.48e-22 | 84.7 | |
| Aann5g03433 | . | 918 | 961 | AGC Kinase gene family | AT3G45780 | 59.091 | 1.59e-10 | 52.0 | |
| Aann5g04081 | . | 119 | 491 | AGC Kinase gene family | AT5G58140 | 30.026 | 7.76e-43 | 158.0 | |
| Aann5g05488 | . | 1 | 486 | AGC Kinase gene family | AT3G10540 | 75.764 | 0.0 | 765.0 | |
| Aann6g01826 | . | 1 | 183 | AGC Kinase gene family | AT3G44610 | 51.042 | 7.43e-48 | 161.0 | |
| Aann6g02029 | . | 16 | 408 | AGC Kinase gene family | AT3G20830 | 58.955 | 2.35e-159 | 452.0 | |
| Aann6g03893 | . | 24 | 538 | AGC Kinase gene family | AT4G14350 | 82.364 | 0.0 | 896.0 | |
| Aann6g04225 | . | 99 | 765 | AGC Kinase gene family | AT2G44830 | 69.027 | 0.0 | 882.0 | |
| Aann6g04433 | . | 7 | 271 | AGC Kinase gene family | AT3G08720 | 25.0 | 2.18e-06 | 48.1 | |
| Aann7g01962 | . | 1 | 1291 | AGC Kinase gene family | AT3G17850 | 62.064 | 0.0 | 1485.0 | |
| Aann7g02811 | . | 135 | 269 | AGC Kinase gene family | AT5G58140 | 38.889 | 7.14e-21 | 95.5 | |
| Aann7g03377 | . | 40 | 263 | AGC Kinase gene family | AT5G04510 | 24.686 | 2.60e-11 | 65.9 | |
| Aann8g01391 | . | 1 | 516 | AGC Kinase gene family | AT2G20470 | 76.686 | 0.0 | 832.0 | |
| Aann8g01582 | . | 9 | 360 | AGC Kinase gene family | AT4G13000 | 56.522 | 6.44e-139 | 399.0 |
| Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
|---|---|---|---|---|---|---|---|
| Aann | Pkinase | 9.3e-61 | CL0016 | PK | AGC_RSK-2 |