AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aann4g01177 ATGGTGGATGTGAATATTAGCAAAGAGAATAACAATAAGTATAGATGGAGGAGACATGGAGGAGTTTTTGGATCTCTGGTTGTGGTTTTATTTTCTATGTATTTCAATCCTTTGCGGCATAATCTCATCAATAAAACTTATCTATGTAGTGAGGATACTTGTAAATATTCAGGCATAATTGAGGACTGCTGTTGTGACTACGAGAGCGTTAACAATGTTAATGGAGCAATTTTACATCCCTTGTTGCAACAGCTTGTTACAACTCCCTTCTTCCGATATTTTAAGGTGAAGTTATGGTGTGATTGCCCCTTCTGGCCTGATGATGGTATGTGCCGCCTGCGTGATTGCAGTGTATGCGAGTGTCCAGAACATGAGTTCCCAGAATCTTTTAAGAAACCATCACCGTATATTCTTCCGAAAGATGATCCTGTATGTCAAGAAGGAAAGCCTGAGGCTACAGTTGACCGTACTCTAGATGCTAAGTCTTTTAATGGCTGGGTTGAAATAGATAATCGATGGACTCTTGATGATGAAACTGATAATGGTGAAATGACGTATGTGAACCTGCAATTGAACCCTGAACGTCATACAGGTTACACAGGGCCATCAGCAAGAAGAATATGGGATGCTATATACTCAGAATATTGTCCAAGATATGCATATGGAGAGACTTGCCCAGAAAAGAAAGTACTATACAAGCTAATATCTGGTTTGCATTCCTCAATTTCAATCCATATAGGTGCAGATTATCTACTTGACGAGAGTAGCTATAAGTGGGGTCCAAATCCTGAATTGATGTATAATCGTGTCTTGAAACATCCTGATCGTGTGGAAAACTTGTACTTCACTTTCCTGTTTGTTCTTAGAGCTGTGACAAAAGCGGCTGCTTACCTGGATCAGGCTGAGTATGATTCCGGTAACCATGTGGAGGATCTTAGAGCCCAATCTTTAATTCGACAAATGGTTCACAATTCTGAATTGCAAGCTGCATGTGCTCTTCCATTTGATGAGGCTGAGCTGTGGCAAGGCCAAGGTGGACCCATACTCAGGCAACAGATCCAAAATCAGTTTCGAAACATCAGTGCACTCATGGACTGTGTAGGGTGTGAGAAGTGTCGTCTTTGGGGAAAACTTCAAGTTCTTGGTCTTGGAACTGCATTGAAGATTCTGTTCTCTGTCAATGATCAGAGTAACCCGGACCCGCATCTGCAATTACAAAGGAATGAAGTGATCGCTTTAATTAATCTACTAAATCGGCTATCAGAATCCCTTATATATGCTACTACAATAAAACTACCCACTACAGATATCAGTTTGATTAACCAAGCTTGGGGAGTGATGGCTCCTTGGTGGAAGAACCTGTCAAAAACTAGCTGA 1377 41.03 MVDVNISKENNNKYRWRRHGGVFGSLVVVLFSMYFNPLRHNLINKTYLCSEDTCKYSGIIEDCCCDYESVNNVNGAILHPLLQQLVTTPFFRYFKVKLWCDCPFWPDDGMCRLRDCSVCECPEHEFPESFKKPSPYILPKDDPVCQEGKPEATVDRTLDAKSFNGWVEIDNRWTLDDETDNGEMTYVNLQLNPERHTGYTGPSARRIWDAIYSEYCPRYAYGETCPEKKVLYKLISGLHSSISIHIGADYLLDESSYKWGPNPELMYNRVLKHPDRVENLYFTFLFVLRAVTKAAAYLDQAEYDSGNHVEDLRAQSLIRQMVHNSELQAACALPFDEAELWQGQGGPILRQQIQNQFRNISALMDCVGCEKCRLWGKLQVLGLGTALKILFSVNDQSNPDPHLQLQRNEVIALINLLNRLSESLIYATTIKLPTTDISLINQAWGVMAPWWKNLSKTS 458
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aann4g01177 458 SUPERFAMILY ERO1-like 65 431 IPR037192 -
Aann4g01177 458 PANTHER ERO1-RELATED 43 429 IPR007266 GO:0005783(InterPro)|GO:0005789(PANTHER)|GO:0015035(InterPro)|GO:0015035(PANTHER)|GO:0016972(InterPro)|GO:0034975(PANTHER)|GO:0034975(InterPro)|GO:0071949(InterPro)
Aann4g01177 458 Pfam Endoplasmic Reticulum Oxidoreductin 1 (ERO1) 78 424 IPR007266 GO:0005783(InterPro)|GO:0015035(InterPro)|GO:0016972(InterPro)|GO:0034975(InterPro)|GO:0071949(InterPro)
Aann4g01177 458 PIRSF ERO 22 448 IPR007266 GO:0005783(InterPro)|GO:0015035(InterPro)|GO:0016972(InterPro)|GO:0034975(InterPro)|GO:0071949(InterPro)
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aann4g01177 K10950 ERO1-like protein alpha [EC:1.8.4.-]
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Event-related genes

Select Gene_1 Gene_2 Event_name
298 Aann1g02280 Aann4g01177
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Aann Aann-Chr4:63002724 Aann5g00065 Aann-Chr5:7947140 dispersed
Aann Aann-Chr2:79519540 Aann4g01177 Aann-Chr4:63002724 transposed
Aann Aann-Chr1:71668334 Aann4g01177 Aann-Chr4:63002724 wgd