AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aann4g01179 ATGAGAGAAGAAGGCATGAGCTCAACTGGGGACCCACTTCTTTTCCCCAATTCACCTCCTCCTACTGCTGCTGCTAGTTCTGCTGGGGCATCATCACCAGCTTTTGCCACCAATGCTGGCAGTGCAGATTGGTTGGGTCATGGACAGGGATCCAAAGCAGGTTCTCTATCTCGGATTAGTTCACAGCCAATGTGGATTTCGTTGAGCACAAGTGCTTGTGGTTCAGCTCTTGGCTCGTCCCAACCTTCATGTAGACCATGGGAAAGGGGTGACCTTCTTAGACGACTATCCACATTCAGGCCTGCAAATTGGTTTGGAAAGCCTAAGGCTGCTAGCTCACTTGCCTGTGCTAGAAGAGGGTGGGTGAATGTGGATGTTGATAAGATTCAATGTGAGTCTTGTGGTGCCAACCTGAAATATAATGCACCTGATTCACATGCTCATACAGAAGGTGAAAATGGTGAAGAATTTGCCAATCAGCTCGATGAAGGACACAATGTCACATGTCCATGGAGAGGAAACAGCTGTGCAGAAAGTTTAGTGCAGTTCCCACCTACTCCTCCATCAGCCCTTATCGGGGGTTACAAGGACCGTTGTGATGGACTCCTTCAGTTTCCGTATCTACCTGTTGTGGCTGCTTCTGCCATTGAGCAGATGAAGCTTTCTAGAGGTCCAGAAATCGACCGCCTTCTGGTTCAGTCAGCTGGTTTTTTTGTAGATGTTGCATCTGATTTGGAGATAAGCGTATATTCACGTGCCCAGAAGTTAATAAGTCTTTGTGGATGGGAACCGAGGTGGCTTTCAAATATTCAAGACTGTGAAGAACATTCTGCTCAATCTGCTAGGAATGGGGCTTCTTTCAGTCCAATTAAAGATGATAGAAATCGTAACAAGAAACTTATGTCTGCTTCAACCAAAAAAATTCCTCGGGCCCCATCAAAGTTTGAATCTAGATCACCACTGTTGGATTGCAGCTTATGTGGCGCCACAGTGAGAATCTTGGATTTTATTCGAGTTAATCGTCCAGCTCGTTTTGCTCCTAACAACATCGATGTTCCCGAAACAAGTAAAAAGATGGCACTTACTCGTGGGGTAAGTGCTGCTAGTGGAATTAGTGGGTGGGTGGCAGATGGTGGTGGGGAGAAAGAGCAAACAGAAGACGTTGATGAAGCTGCAACCACCGGAGACGGGAAATCGATGTCGAATATTAGGGTTGATTTAAATCTCACAATGGGAAGTGGGTTTCCTACGGGACACGGGAACAAGAGACCAATATCTGAACTCTACCAAGAAGTAAATATAGGGAGGGATTTAGTCATTGGGCAGCCAGCTGGCAGTGAGGTCGGCGATCGGGCACAATCATTTGAATCCCGAGGTCCTACTACTTTTAAAAGGAACATGGATGAAGGTGGGTCTACTGTCGATAGGCCACAAGGGACAATTCGTCAGGCGGATAGTGTTGAAGGTGTTGTTATTGACCGTGATGGTGATGAAGTCAATGATAGCAAGATGTCCCCGGGCCCATCTAAACGTGCACGTGAGTCTCATGCCTTTGAACACTTTGAACCATCGTCTGGTGCAGGCCCTAGCCAAACATTGTATTTTGATATTGGAAGGGCGGGTCCTTCAAGTCAAGGCAATGAACTGACGGGCCGAGCTTCATCTGTTATAGCAATGGATACAGTTTGTCATAGTGATGATAACGATTCTATGGAAAGTGTCGAAAATCATCCGGGTTTTATTGATGAGGTCAATTACCCATCTGGGTCAGGAGTCAAAAGCCCAGATGTCAATGATAATTCTGATTTAAACGTTAGTATTCAGGCTCAGCAAAGTGTGTGCCCGCCTGCGGTTCATGTCACAGGTGAGATAGGTGTTAGCAGCACCAATGATGATGAAGTACTGAACACTGATACTACCACAATTCACGGGCGGGATGGTCCTAGTTTTGCTATTAGTGGTGGTAGTGTCGGTATGGGTGTGAGTCATGAAGCTGAGATTCATGGCTCTGATGCTTTGATTCATAGGACGGAAAGTGTTGTCGGTGACATGGAACCTGTTACTGGTGTGACCGAAAATCAAGGTCAAACTGGTGAATTTGTTCCGGAGGAAGTGCAGCAAGAATGTTCTGGAAGGGCAGATAGTGGGTCAAAGATTGTTGGTTCGGTCAAGGCGGAATCTGTTGAGAGTGGTGACAAGACCAGTGATTTGAATCTTTTGCCACACGAGCACAGTGATCATCCGTCGCTTTCTTGCAACGCGGTTGTATTTTCTGGGATTGAAGCATCAAAGGATGAAGTGACACAGGGGGGGAAGTCGTCTCCTAACGATGAATGTGGCTACCCAAGTTATCCGCCTGTAAATGGTATAGGGCCTCCAAATGGAGAAAGCAACTTTGAAGAAGCAGTTGAGTTTGATCCAATCAAGCATCATAATTTCTTCTGCCCGTGGGTGAATGGAAATGTTGCTGCAGCTGGGGTTAGCAACAACACTAACGGTGCCAGTGCCAGCTCCAGCTCAAGTGTTAGCGGTCTAGCTCTCTGTGGCTGGCAGCTGACTTTGGATGCTTTAGATGGCTTCCAAGGACCTGAACAAAACCAAAGTGTGGAATCTGAATCTGCTGCTTCTCTCTACAAGGATGAGCATCAAGTTTCTGGTCGAAAACTCATGGCACGACACTCCTTCAACAGAAGCCATGGCCATAGCTGA 2709 46.77 MREEGMSSTGDPLLFPNSPPPTAAASSAGASSPAFATNAGSADWLGHGQGSKAGSLSRISSQPMWISLSTSACGSALGSSQPSCRPWERGDLLRRLSTFRPANWFGKPKAASSLACARRGWVNVDVDKIQCESCGANLKYNAPDSHAHTEGENGEEFANQLDEGHNVTCPWRGNSCAESLVQFPPTPPSALIGGYKDRCDGLLQFPYLPVVAASAIEQMKLSRGPEIDRLLVQSAGFFVDVASDLEISVYSRAQKLISLCGWEPRWLSNIQDCEEHSAQSARNGASFSPIKDDRNRNKKLMSASTKKIPRAPSKFESRSPLLDCSLCGATVRILDFIRVNRPARFAPNNIDVPETSKKMALTRGVSAASGISGWVADGGGEKEQTEDVDEAATTGDGKSMSNIRVDLNLTMGSGFPTGHGNKRPISELYQEVNIGRDLVIGQPAGSEVGDRAQSFESRGPTTFKRNMDEGGSTVDRPQGTIRQADSVEGVVIDRDGDEVNDSKMSPGPSKRARESHAFEHFEPSSGAGPSQTLYFDIGRAGPSSQGNELTGRASSVIAMDTVCHSDDNDSMESVENHPGFIDEVNYPSGSGVKSPDVNDNSDLNVSIQAQQSVCPPAVHVTGEIGVSSTNDDEVLNTDTTTIHGRDGPSFAISGGSVGMGVSHEAEIHGSDALIHRTESVVGDMEPVTGVTENQGQTGEFVPEEVQQECSGRADSGSKIVGSVKAESVESGDKTSDLNLLPHEHSDHPSLSCNAVVFSGIEASKDEVTQGGKSSPNDECGYPSYPPVNGIGPPNGESNFEEAVEFDPIKHHNFFCPWVNGNVAAAGVSNNTNGASASSSSSVSGLALCGWQLTLDALDGFQGPEQNQSVESESAASLYKDEHQVSGRKLMARHSFNRSHGHS 902
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aann4g01179 902 MobiDBLite consensus disorder prediction 20 34 - -
Aann4g01179 902 MobiDBLite consensus disorder prediction 1 34 - -
Aann4g01179 902 PANTHER NUCLEAR-INTERACTING PARTNER OF ALK 1 900 - GO:0005634(PANTHER)
Aann4g01179 902 MobiDBLite consensus disorder prediction 444 478 - -
Aann4g01179 902 MobiDBLite consensus disorder prediction 372 400 - -
Aann4g01179 902 Pfam C3HC zinc finger-like 86 205 IPR012935 GO:0008270(InterPro)
Aann4g01179 902 MobiDBLite consensus disorder prediction 863 883 - -
Aann4g01179 902 MobiDBLite consensus disorder prediction 281 309 - -
Aann4g01179 902 MobiDBLite consensus disorder prediction 495 514 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aann4g01179 - -
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Event-related genes

Select Gene_1 Gene_2 Event_name
562 Aann1g03630 Aann4g01179
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Aann Aann-Chr1:101127189 Aann4g01179 Aann-Chr4:63056931 transposed
Aann Aann-Chr1:87106739 Aann4g01179 Aann-Chr4:63056931 wgd