Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Aann4g01194 | ATGGCAGCAGCAGTTGGAGCATTAAAACCACCACATTTCATCACTTCCTCCTCCTCATCATCTGACAAAAGAACCAACCTCCTCCGTTCATCCTTATCATTCTCCTCATCACTTTGTGAAAGAATATCTTCATCCGTACAACCACGTCGTAGGAGTAGTAATAGTAATGGTAGTAGTAGTAGAGCTCCGTTAGTTGTTTGTCCGAAATCAGTTTCGGATTCTAAGAATTCGCAGACATGTCTTGATCCTGACGCTAGCCAAAGTGTTTTGGGTATAATACTCGGAGGTGGAGCGGGGACTCGTCTCTATCCTTTAACAAAGAAGAGAGCGAAGCCTGCTGTTCCTTTGGGAGCAAACTATCGCCTAATCGACATTCCTGTCAGCAATTGCTTGAACAGCAACATTTCAAAGATTTACGTTCTTACACAGTTCAACTCTGCTTCACTTAATCGTCACCTTTCACGGGCTTATGCAAGTAACATGGGTGGTTATAAGAATGAAGGGTTTGTTGAAGTCCTTGCTGCTCAACAAAGTCCCGAGAATCCAAACTGGTTTCAGGGTACTGCCGATGCTGTAAGGCAGTATTTGTGGCTGTTTGAAGAGCATAATGTTCTAGAGTTCCTTATCCTTGCTGGAGATCACTTATATCGTATGGATTACGAGAAGTTTATTCAAGCTCACAGAGAAACAGATGCTGATATCACTGTAGCAGCTCTGCCAATGGATGAAAAGCGTGCAACTGCATTTGGTCTCATGAAGATTGATGAAGAAGGGCGTATAATTGAATTTGCAGAGAAACCAAAAGGAGAGCAACTGAAAGCTATGAAAGTTGATACTACAATTTTAGGACTTGATGAGGAGAGAGCTAAAGAGATGCCTTATATTGCTAGTATGGGTATATATGTTGTCAGCAAAGATGTAATGTTGGATTTGCTGCGAGATAAGTTCCCTGGAGCAAATGATTTTGGAAGTGAAGTAATTCCTGGAGCAACTTCTATTGGGCTAAGAGTACAAGCTTATCTTTATGATGGTTACTGGGAAGATATTGGTACCATTGAGGCTTTCTATAATGCCAATTTGGGAATTACAAAGAAACCAGTGCCAGATTTCAGTTTCTACGATCGTTCGTCTCCTATTTACACCCAACCTCGATATTTGCCTCCTTCCAAGATGCTTGATGCTGATGTCACAGATAGTGTTATTGGTGAAGGGTGTGTGATTAAGAACTGCAAAATTCATCATTCTGTTGTTGGACTTCGATCTTGCATAGCTGAAGGTGCAGTCATTGAAGATTCATTGCTGATGGGAGCAGATTATTATGAGACTGATGCTGACAGGGAGCTTCTTGCTGCAAAAGGTAGTGTTCCGATTGGTATTGGGAAGAACACTCACATCAAAAGAGCAATCATTGACAAGAATGCACGCATAGGAGACAATGTGAAGATTATAAACAGTGATAACGTTCAAGAAGCAGCAAGAGAAACAGATGGGTACTTCATAAAAAGCGGAATCGTGACAGTCATCAAAGATGCGTTGATTCCTTCTGGCAGCATTATCTAG | 1560 | 41.54 | MAAAVGALKPPHFITSSSSSSDKRTNLLRSSLSFSSSLCERISSSVQPRRRSSNSNGSSSRAPLVVCPKSVSDSKNSQTCLDPDASQSVLGIILGGGAGTRLYPLTKKRAKPAVPLGANYRLIDIPVSNCLNSNISKIYVLTQFNSASLNRHLSRAYASNMGGYKNEGFVEVLAAQQSPENPNWFQGTADAVRQYLWLFEEHNVLEFLILAGDHLYRMDYEKFIQAHRETDADITVAALPMDEKRATAFGLMKIDEEGRIIEFAEKPKGEQLKAMKVDTTILGLDEERAKEMPYIASMGIYVVSKDVMLDLLRDKFPGANDFGSEVIPGATSIGLRVQAYLYDGYWEDIGTIEAFYNANLGITKKPVPDFSFYDRSSPIYTQPRYLPPSKMLDADVTDSVIGEGCVIKNCKIHHSVVGLRSCIAEGAVIEDSLLMGADYYETDADRELLAAKGSVPIGIGKNTHIKRAIIDKNARIGDNVKIINSDNVQEAARETDGYFIKSGIVTVIKDALIPSGSII | 519 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Aann4g01194 | 519 | SUPERFAMILY | Trimeric LpxA-like enzymes | 382 | 519 | IPR011004 | - | |
| Aann4g01194 | 519 | PANTHER | GLUCOSE-1-PHOSPHATE ADENYLYLTRANSFERASE-RELATED | 45 | 519 | IPR011831 | GO:0005978(InterPro)|GO:0008878(InterPro) | |
| Aann4g01194 | 519 | CDD | ADP-Glucose-PP | 100 | 349 | - | - | |
| Aann4g01194 | 519 | Gene3D | Hexapeptide repeat proteins | 385 | 519 | - | - | |
| Aann4g01194 | 519 | ProSitePatterns | ADP-glucose pyrophosphorylase signature 2. | 184 | 192 | IPR005836 | GO:0005978(InterPro)|GO:0008878(InterPro) | |
| Aann4g01194 | 519 | Pfam | Nucleotidyl transferase | 91 | 364 | IPR005835 | GO:0009058(InterPro) | |
| Aann4g01194 | 519 | FunFam | Glucose-1-phosphate adenylyltransferase | 70 | 384 | - | - | |
| Aann4g01194 | 519 | NCBIfam | glucose-1-phosphate adenylyltransferase | 89 | 483 | IPR011831 | GO:0005978(InterPro)|GO:0008878(InterPro) | |
| Aann4g01194 | 519 | CDD | LbH-G1P-AT-C | 387 | 513 | - | - | |
| Aann4g01194 | 519 | Gene3D | Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A | 69 | 384 | IPR029044 | - | |
| Aann4g01194 | 519 | FunFam | Glucose-1-phosphate adenylyltransferase | 385 | 519 | - | - | |
| Aann4g01194 | 519 | MobiDBLite | consensus disorder prediction | 45 | 64 | - | - | |
| Aann4g01194 | 519 | SUPERFAMILY | Nucleotide-diphospho-sugar transferases | 88 | 480 | IPR029044 | - | |
| Aann4g01194 | 519 | ProSitePatterns | ADP-glucose pyrophosphorylase signature 1. | 95 | 114 | IPR005836 | GO:0005978(InterPro)|GO:0008878(InterPro) | |
| Aann4g01194 | 519 | ProSitePatterns | ADP-glucose pyrophosphorylase signature 3. | 296 | 306 | IPR005836 | GO:0005978(InterPro)|GO:0008878(InterPro) |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Aann4g01194 | K00975 | glucose-1-phosphate adenylyltransferase [EC:2.7.7.27] |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Aann | Aann-Chr3:57752296 | Aann4g01194 | Aann-Chr4:64739925 | dispersed | |
| Aann | Aann-Chr4:64739925 | Aann8g02734 | Aann-Chr8:123737551 | dispersed |