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AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aann4g01211 ATGGCAAAGCAAAAGATTGTTGTGAAGGCGACCATGGAAAATGACCAGAAAAGTCGTAAGGCTAAGAAGATCGCGGTTAGTGTATCTGGCGTGGAATCAGCGACTTTCGTTTCAGATAAGGAGCAGATAGTAGTGACCGGAGAAGGTATTGACCCAGTCAAACTGGCCAAGAAGCTAAGAAAAGGTGTAGGATACTCTGAGCTGGTGAGTGTTGGTCCCGTGGAGGAGAAGAAACCCGTCGCTACAGCTGCTCCGGTGGCTCAACCGCAAACACAAGTCGTGCCACTAAATGTTTATCCCTACCCTTACAATCATGGCGTACCCTACCATATACATGAAAATTCCTACAACAATGAGCCCTTTTGCACAATTCTTTAA 378 46.3 MAKQKIVVKATMENDQKSRKAKKIAVSVSGVESATFVSDKEQIVVTGEGIDPVKLAKKLRKGVGYSELVSVGPVEEKKPVATAAPVAQPQTQVVPLNVYPYPYNHGVPYHIHENSYNNEPFCTIL 125
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aann4g01211 125 PANTHER OS04G0464100 PROTEIN 4 101 IPR044296 -
Aann4g01211 125 Gene3D - 1 77 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aann4g01211 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Aann Aann-Chr4:65282815 Aann4g01217 Aann-Chr4:65439770 dispersed
Aann Aann-Chr4:65183959 Aann4g01211 Aann-Chr4:65282815 proximal
Aann Aann-Chr4:65282815 Aann4g01212 Aann-Chr4:65375240 tandem