AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aann4g01236 ATGAGTAAGGTATCATCAATGCCAAACAATGTTAAAAAGATGATCCAAAACATTAAAGAGATCACAGGTAATAATTACAGTGAAGATGAGATTTATTCCATGCTTAAAGATTGTTCCATGGATCCAAATCAAACCACTCACAACCTTCTCTCAATGGATCCATTTCATGAAGTTAAAAGGAAGCGTGATCGCAAGAAGGAGAATGTGAATAAAGAATCTACAGAGCCCAGACAGAAACCTGGGATGCAGGGGCGGGGGAATAGAGGTGGTCGAGGGAACTACTCAGCACGTCACATTTCTAATGGTGGTGGCAGGAACTCACTTCCTGCAAAAGAAAATGGAATCATTCAAGGTGTAGAGGATGGTCCAAAACAATCAATGCCTCAGGGTCAGAAGAAAAATGAGTCATTGGTTGCAAGCTCTTCTCGTGATGTACCTGATGGTTCATCTGGTAAGAAGCAATCTGAAGCATCTGCATCTACTGCAAGTAGTAAATTGGAGGGTCCACTGCCACGGATCCCGCCTATCGAGGCAAGTAAGGGTCCCATTGTCGATGTCGTGTTCGGGAGCACACATGGATCTCTTTCCAATAACATATCAGCTTCTAAGACACCACCAGCTTCACCAGGGGTCTTTCTCTCTGATTCAGATCCTATTCTGATGCCCTCACAAGATTCACGAACGCCTGTGGGTACAATCAGACGGGAAGTTTGGAGTCAGAAAACTCCAGTTGAACAAATTCATGAGACCCCATGTGAGATAAAGTCAACTGCTTATGGATCTGAGGGTGGAAACTTTTCCATGCAAGGGAAGGCATCCGGCGAGCTTCAGGGAGTGGGGAAGAATATAAATTCGGATTCTTCACGACCAGGGTCATCTTCTCGTGTCTCCTTTTCTACTAGCAGGCCTTCTTCAAATCATAATAATAGGACGCAACAAGGGATTGGTTCTCAAAAAGTTGGGCCTAGTATGGAATGGAAACCGAAAGCGGTTAATCCTGTTCTTGCTCAAGGGACTGGGTCAGGTGAGTCAGTTAAGGTACCTGCGGTTCCAGTCGAAGATCACACTTCAACCCTGTCTGCATCCAATAATCTTGGTTCGCAGGATACTATTCGTGAATTGGAGAAGAAGTTAGAGGAGTCGCACATTTCAGATGTTCAACATGTTATTATCCCTGATCATCTTCATGTTCCTGAAGCCGAGAAACTCGGGTTCTGCTTTGGGAGTTTTGATCCCAGTTTCGGGTTTAATGCAAGCTCGTCAAATGGTCCCGTGAGTGACGTGAGTTCTGAGGTTTCTGAGGTGGTTGATGAAAGTATAGAGGGGCAACCCAGAAATCAAAATGAATTGGCAAGCGCCGATGAAGGTTATCAACCTGATCGTCCAACATCCTCTAGTAACATGCCCGAGAGTTTATCAGTTGACGGTGATGTCTCGTCAAATGTGGCCCCTGAGTACCAAGAGTCCAAGGAAGAAACTTCACTCCCAACCGCAGGCCATCAATACCCTGTTCACACATCACCTAATTTCAGCTTTGGCTTCATGCCACCAATGATTGGGAACCAGCTTTCATCTTTTGACAGCAACGAGTCTCAGGGACGTGATGGTTTCCGCGTCCCAAGTCTTGTAGTTCCGCAACCATTTGACCCAGCAAGCTATTATGCCCAGTTCTATCATTCTGGTGCTGATGGTGATGGTCGCATGTCACCCTTCCACTCAACTGGCCCTACCAAGTTCAATGGAAATGTTCCAATGTTATCATCTCAGGAGGTTGGGAACTCCTTAATGCTGTCTGCTGCTGGTCCAACACCCGCTTCACAAACTGGTGCGCTTACGCAGGGCTCTATAGCTGTGACTCAGCAACCATTGCCTGTGTTCAGGCAGCCAACCGGTGTTCACCTGTCCCACTATCCTCCAAATTTTATGCCTTATGGTCCATATTTTTCCCCATATTATGTACATCCACCACCTATTCATCAGTTTTTGAATAACGGTACATTCCCTCAACAACCTCAAGGTGGTAGTATGTATCCGGTCCCACCATTGGCTAGCCCTAAATATCCACTTGCACAATACAAGCCCGGAGGTAATGCAGGGAACTCGGGGCATATTGGAATGCCTGGTGGTTATGGACCTTATGGCTCTACCCCTGCAGGCTATAACCCTGGTTCAGCCACTACAGCTGGCAATTCGACCTCCAGTGAAGACCTTGGTGGGCCCCAGTTCAAGGAAAGTAATGCATACATGACTGGACAGCAGAGTGAAGCTCCGGGTGTATGGTATGCTGCACCAGGCCGAGACATGTTTGGTTTACAGGCTAATTCTTTCCATAATCATTCACAAGGTGGTCAAGTTGCATATGGTACACAAGCTGGACATGGTACATTTGCTGGTATTTATCACCCTGCACAACCAGTAACCACAGGAGCGATTCACCCTCATCTTCAACAGTCTGGAACCAGTGTTGACATGGTGGGACCCGCTGCTAGCGTGTATCAGCAACCACAAAACGCTCAAATGAATTGGCCTAACAACTACTGA 2541 46.56 MSKVSSMPNNVKKMIQNIKEITGNNYSEDEIYSMLKDCSMDPNQTTHNLLSMDPFHEVKRKRDRKKENVNKESTEPRQKPGMQGRGNRGGRGNYSARHISNGGGRNSLPAKENGIIQGVEDGPKQSMPQGQKKNESLVASSSRDVPDGSSGKKQSEASASTASSKLEGPLPRIPPIEASKGPIVDVVFGSTHGSLSNNISASKTPPASPGVFLSDSDPILMPSQDSRTPVGTIRREVWSQKTPVEQIHETPCEIKSTAYGSEGGNFSMQGKASGELQGVGKNINSDSSRPGSSSRVSFSTSRPSSNHNNRTQQGIGSQKVGPSMEWKPKAVNPVLAQGTGSGESVKVPAVPVEDHTSTLSASNNLGSQDTIRELEKKLEESHISDVQHVIIPDHLHVPEAEKLGFCFGSFDPSFGFNASSSNGPVSDVSSEVSEVVDESIEGQPRNQNELASADEGYQPDRPTSSSNMPESLSVDGDVSSNVAPEYQESKEETSLPTAGHQYPVHTSPNFSFGFMPPMIGNQLSSFDSNESQGRDGFRVPSLVVPQPFDPASYYAQFYHSGADGDGRMSPFHSTGPTKFNGNVPMLSSQEVGNSLMLSAAGPTPASQTGALTQGSIAVTQQPLPVFRQPTGVHLSHYPPNFMPYGPYFSPYYVHPPPIHQFLNNGTFPQQPQGGSMYPVPPLASPKYPLAQYKPGGNAGNSGHIGMPGGYGPYGSTPAGYNPGSATTAGNSTSSEDLGGPQFKESNAYMTGQQSEAPGVWYAAPGRDMFGLQANSFHNHSQGGQVAYGTQAGHGTFAGIYHPAQPVTTGAIHPHLQQSGTSVDMVGPAASVYQQPQNAQMNWPNNY 846
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aann4g01236 846 MobiDBLite consensus disorder prediction 260 319 - -
Aann4g01236 846 SUPERFAMILY UBA-like 8 70 IPR009060 GO:0005515(InterPro)
Aann4g01236 846 PANTHER FLOCCULATION PROTEIN (DUF1296) 2 846 IPR044277 GO:0051082(PANTHER)
Aann4g01236 846 MobiDBLite consensus disorder prediction 127 165 - -
Aann4g01236 846 Pfam GBF-interacting protein 1 N-terminal 8 67 IPR009719 -
Aann4g01236 846 MobiDBLite consensus disorder prediction 190 209 - -
Aann4g01236 846 MobiDBLite consensus disorder prediction 420 501 - -
Aann4g01236 846 MobiDBLite consensus disorder prediction 440 501 - -
Aann4g01236 846 MobiDBLite consensus disorder prediction 53 74 - -
Aann4g01236 846 MobiDBLite consensus disorder prediction 256 325 - -
Aann4g01236 846 MobiDBLite consensus disorder prediction 39 230 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aann4g01236 - -
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Event-related genes

Select Gene_1 Gene_2 Event_name
555 Aann1g03611 Aann4g01236
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Aann Aann-Chr2:51552759 Aann4g01236 Aann-Chr4:66455350 transposed
Aann Aann-Chr4:89147074 Aann4g01236 Aann-Chr4:66455350 transposed
Aann Aann-Chr1:86849798 Aann4g01236 Aann-Chr4:66455350 wgd