AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aann4g01256 ATGGCGGCAATACTAGCTTCCAACAGCTGCTATTGCCGTGATGTGCAATTCGTAAACCAAGGAAGAACAACAGACAGTCTCAGCTTCTCGAGATCTGTTTCTAACCAAAAACTAGACCAACATGACTGTACTTTACCCAAAAGTCAAAGGTTGCCCAAGTTTCATGTCAAGATGCAGCAGACGGAATCACCCATGAAATCTGGCACCAATGGTCGACCTACAAATGGCCAACCTGTAAAATTGGGTGCTAATGGCAAACCAGTGAATTTGGGTGCTAATGGACAACCCGTGAAATTAGGTAGCAAAGGTCAACCGATCACAATGGTTTCCACCAGTGATGTGGTAAATAACAAACAAACAGCAGGAATAGTGAATGGGTCGACAAAAGTTGTTAATGGAACAAGTCTTGTTAGGAGAGCGACCACACCGCCGCTAGTTAAGTCTGTAAAAGTTAAAGAATCCACAGGCTTTCCGCCTTCTGAGGATTTGAGGGTCTTGCCGTCTGATGAAAGTTTCAGTTGGGCGAATGAGAATTATAACTCGGTACAAAGATCAATAGATGTGTGGTCTTTTGTTCTTTCTTTACGTGTTCGTGTTTTATTTGACAATGCTAAGTGGGCGTATCCTGGAGGCTTCACAGAAGACAAACAGAAAGGCAGAAGAAGAAAAACGGCTGCATGGTTAAGAGAGAGTGTCCTTCAACTTGGTCCAACATTTATTAAACTTGGGCAGTTATCTTCAACAAGATCAGATCTATTTCCACGTGAATTTGTCGACGAGCTCGCCAAATTACAGGATAGAGTACCAGCATTCTCACCAGAAAAAGCAAAGGGTTTCATTGAAAAAGAATTGGGTGCTCCGGTTAATATAATCTTTAAGGAGTTTGAAGAACGACCAATTGCAGCTGCTAGTCTTGGTCAGGTACATCGTGCAATCTTACATAACGGAGAGAAAGTAGTTGTTAAAGTTCAAAGACCTGGTCTGAAGAAACTTTTTGACATCGATTTACGGAATCTAAAGCTAGTCGCAGAGTATTTTCAAAGAAGTGAATCTCTTGGTGGCCCAACAAGGGACTGGATAGGAATCTATGATGAATGTGCAAAGATCTTGTACCAGGAGATTGATTATATAAATGAAGGGAAAAATGCTGATAGATTTCGTCGGGACTTTCGTAATATAAAGTGGGTCCGAGTGCCTCAAGTATTCTGGGATTATACTGCAAAGAAGGTGCTGACTTTGGAGTATGTTCCAGGCATTAAGATCAACAATATAGATGCTATAAAAGAAAGGAGTTACAGTCGATCCCGGATCTCTTCACGCGCCATTGAATCATACTTGATTCAGATCCTGAAAACAGGTTTCTTTCATGCTGATCCTCATCCCGGAAATCTTGCTATTGACGTGGATGAATCACTAATCTACTATGATTTTGGCATGATGGGGGAGATTAAGTCCTTCACCAGAGAAAGATTGATGGATCTTTTTTATGCGGTTTATGAAAAAGATGCAAAAAAGGTTATGAACAGTTTGGTTAGTCTTGAAGCCCTTCAACCTACTGGAGACATGTCACCGGTTAGGCGATCCGTTCAGTTCTTTTTGGACAATTTGCTGAATCAATCACCAGATCAGCAGACAACTTTGGCTGCCATAGGCGAGGATTTATTTTCTATAGCAACGGATCAGCCTTTTCGGTTCCCATCCACCTTCACGTTTGTAATTAGGGCATTTTCCACTCTTGAAGGAATTGGCTACTCACTTGACCCAGATTTTTCATTTGTTAAGATTGCTGCACCTTACGCACAGGAACTGTTAGATCTCAAAGAACAGCGGCCAAGTGGAACACAACTTGTTGCAGAAATGCGTAAACAAGCTGATGATGCAAGATCAAATACCATGTCGATGCCTTACAGAGTTCAGCGAATTGAAGAGTTTGTGAAACAACTAGAAATAGGAGACATTAAACTTCGTGTCAGAGTTCTTGAGTCTGAACGAGCAGCTAAGAAGGCAACAATATTGCAAATGGCAACAATGTACACAATAATCGGGGGTACCCTTGTAAACATTGGTGTCACATTTAGCACACAAGCTGGCAGCCAACTTATAGCAAACGGGTCCTTTGTTGGCGCAGGTGTTTTCATAGCTTTGCTTATTAGGTCCATGCAAAGGGTGAAGAAGCTTGATAAATTCGAAAAGATGATATAA 2202 41.55 MAAILASNSCYCRDVQFVNQGRTTDSLSFSRSVSNQKLDQHDCTLPKSQRLPKFHVKMQQTESPMKSGTNGRPTNGQPVKLGANGKPVNLGANGQPVKLGSKGQPITMVSTSDVVNNKQTAGIVNGSTKVVNGTSLVRRATTPPLVKSVKVKESTGFPPSEDLRVLPSDESFSWANENYNSVQRSIDVWSFVLSLRVRVLFDNAKWAYPGGFTEDKQKGRRRKTAAWLRESVLQLGPTFIKLGQLSSTRSDLFPREFVDELAKLQDRVPAFSPEKAKGFIEKELGAPVNIIFKEFEERPIAAASLGQVHRAILHNGEKVVVKVQRPGLKKLFDIDLRNLKLVAEYFQRSESLGGPTRDWIGIYDECAKILYQEIDYINEGKNADRFRRDFRNIKWVRVPQVFWDYTAKKVLTLEYVPGIKINNIDAIKERSYSRSRISSRAIESYLIQILKTGFFHADPHPGNLAIDVDESLIYYDFGMMGEIKSFTRERLMDLFYAVYEKDAKKVMNSLVSLEALQPTGDMSPVRRSVQFFLDNLLNQSPDQQTTLAAIGEDLFSIATDQPFRFPSTFTFVIRAFSTLEGIGYSLDPDFSFVKIAAPYAQELLDLKEQRPSGTQLVAEMRKQADDARSNTMSMPYRVQRIEEFVKQLEIGDIKLRVRVLESERAAKKATILQMATMYTIIGGTLVNIGVTFSTQAGSQLIANGSFVGAGVFIALLIRSMQRVKKLDKFEKMI 733
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aann4g01256 733 CDD ABC1-ADCK3-like 263 510 - -
Aann4g01256 733 PANTHER CHAPERONE-ACTIVITY OF BC1 COMPLEX CABC1 -RELATED 94 658 IPR050154 GO:0046467(PANTHER)|GO:0055072(PANTHER)|GO:1901031(PANTHER)
Aann4g01256 733 MobiDBLite consensus disorder prediction 59 80 - -
Aann4g01256 733 Pfam ABC1 atypical kinase-like domain 263 509 IPR004147 -
Aann4g01256 733 SUPERFAMILY Protein kinase-like (PK-like) 265 511 IPR011009 -
Aann4g01256 733 MobiDBLite consensus disorder prediction 59 77 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aann4g01256 K03688 ubiquinone biosynthesis protein
Aann4g01256 K08869 aarF domain-containing kinase
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Aann Aann-Chr1:109483112 Aann4g01256 Aann-Chr4:66907795 dispersed
Aann Aann-Chr4:66907795 Aann7g00894 Aann-Chr7:51265427 dispersed
Aann Aann-Chr4:66907795 Aann9g00673 Aann-Chr9:18150991 transposed