AGRP
Asteraceae Genomic Research Platform
Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Aann4g01258 | ATGGATGAAAATGTCTTTATCTCTTTACTTCGAACATCAATATCTCAATGGCTCCAACAGGGAAAGAAGGGTGTTTGGCTTAAACTCACTATTGAACTTGTGAATCTTGTTAAGCCTGCAGTCCAGGAAGGATTTTGGTACCATCATGCTGAACCAACGTATTTGATGCTCGTGTATTGGATTCCTGAGACTAATCATACCCTCCCACCAAATGCTTCACATCGAGTTGGTGTTGCTTCTTTTGTAGTAAACGATAAAGGGGAGCTTCTCGTAGTGCAAGAGAAAAGCGGAGTGTTCAAAGGCACAGGAGTCTGGAAGTTACCAACTGGTACTGTTGAGGAGGGTGAAGATATATCTGTAGCTGCAATCAGAGAAGTGAAAGAAGAGGTTGCTATTGATACAGAATTCGTGGAAGTCCTAGCATTCAGGCAAAGCCACAAGTCATTTTTTAGCAAGTCCGATTTAATGTTTGTGTGTATGCTCAAACCAAAGTCTTCCGTTATCAAGAAACAAGATTCAGAAATTCAAGCAGCACAGTGGATGCCGGTGGAAGAATACGCCAACCAGCCTTTTATAAAGAAGCACAAGTCATTTGACTACATTGCTAAAATATGCATGGCAAAAAAAGATCACAAATATGTTGGTTTTCCTGCTTTGCCTACAGCAACTGCCACATCCGCCAAGAAGAGCTATTTGTATTCCAGTTATCAAGAGGAGTAA | 720 | 41.11 | MDENVFISLLRTSISQWLQQGKKGVWLKLTIELVNLVKPAVQEGFWYHHAEPTYLMLVYWIPETNHTLPPNASHRVGVASFVVNDKGELLVVQEKSGVFKGTGVWKLPTGTVEEGEDISVAAIREVKEEVAIDTEFVEVLAFRQSHKSFFSKSDLMFVCMLKPKSSVIKKQDSEIQAAQWMPVEEYANQPFIKKHKSFDYIAKICMAKKDHKYVGFPALPTATATSAKKSYLYSSYQEE | 239 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Aann4g01258 | 239 | FunFam | Nudix hydrolase 8 | 75 | 213 | - | - | |
| Aann4g01258 | 239 | PANTHER | NUDIX HYDROLASE RELATED | 1 | 236 | IPR003293 | GO:0035529(PANTHER)|GO:0047631(PANTHER)|GO:0051287(PANTHER) | |
| Aann4g01258 | 239 | PRINTS | Anti-sense to fibroblast growth factor protein GFG signature | 159 | 183 | IPR003293 | - | |
| Aann4g01258 | 239 | PRINTS | Anti-sense to fibroblast growth factor protein GFG signature | 33 | 51 | IPR003293 | - | |
| Aann4g01258 | 239 | PRINTS | Anti-sense to fibroblast growth factor protein GFG signature | 71 | 89 | IPR003293 | - | |
| Aann4g01258 | 239 | Gene3D | Nucleoside Triphosphate Pyrophosphohydrolase | 75 | 213 | - | - | |
| Aann4g01258 | 239 | SUPERFAMILY | Nudix | 42 | 208 | IPR015797 | - | |
| Aann4g01258 | 239 | Pfam | NUDIX domain | 74 | 195 | IPR000086 | - | |
| Aann4g01258 | 239 | Pfam | Nudix hydrolase domain | 1 | 61 | IPR040618 | - | |
| Aann4g01258 | 239 | FunFam | nudix hydrolase 2 | 1 | 66 | - | - | |
| Aann4g01258 | 239 | CDD | Nudix-Hydrolase-12 | 74 | 205 | - | - | |
| Aann4g01258 | 239 | Gene3D | - | 1 | 65 | - | - | |
| Aann4g01258 | 239 | ProSiteProfiles | Nudix hydrolase domain profile. | 73 | 205 | IPR000086 | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Aann4g01258 | K26956 | ADP-ribose/NAD+ diphosphatase [EC:3.6.1.13 3.6.1.22] |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Aann | Aann-Chr4:66987717 | Aann6g04716 | Aann-Chr6:142619077 | dispersed | |
| Aann | Aann-Chr4:66973179 | Aann4g01258 | Aann-Chr4:66987717 | tandem | |
| Aann | Aann-Chr4:66987717 | Aann4g01259 | Aann-Chr4:67000001 | tandem |