Gene detail

Gene Search

Species

Gene ID

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Or, Query Sequence

Example:

Gene details

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Aann4g01283	ATGGACTTTTCAGAATCTACGAAAGTTGTATACGATAGGATCCAAAAGATAGAACCCGCAAACGTCTCCAAGATTATCGGTTATCTTCTTTTGCAAGATCATGGTGAACGAGAAATGATAAGATTAGCCTTCGGCCCGGATAACTTAATTCACTCTTTAATCAACAACGCAAAAAACCACCTCCAATTACCTTCCAATACAACAACTAGTCCCGACATCCCTATTCACTTCACACCATTCTCACCATCGCCTCGTCATTCACCATTAACCATCCAAGTCCCTAATCGTTGCTGTGATCCTCATGGTCAGCCGGTTGACTATGCTCCTATGGTGCATCCATCATCATTTCCTGAAGAATATCGTCTCCATAACCAACTTCGTTTCTTGTCAATGGAAGATCATAACGAGTCCATAAACAGCCCGGATTTTTCTTTTGGTCCTAGAGCCAATAGGCGATCTCCAAGTTTACCTGAATTCCCGTTCAAAGTTTGTCATTACTTTGTTAAAGGTTTTTGTAGGCATGGTAACAACTGTAGGTACATGCATCCTACTGAAAGCTTCTCACAAATCTTTAGCCCTAACATGAGTGAGGAAGATCACGTCTTTTCACCAGGGTCCCTTGAAAAATTAGAGTTAGAACTGACTGAGCTTGTGAAATCAAGAAGAGGGTTCCCTGTGTCGATTGCTTCCTTACCAATGTTGTATTATGAAAAGTTTGGTAAGATACTTCAAGCTGAGGGGTATTTAACTGAGAGTCAAAGACATGGGAAAGCTGGTTATAGTTTGACCAAACTTCTTGCACGCCTTAAGAGCATTGTTCTCATTGATAGGCCTCATGGGCAACACGCAGTCGTGTTGGCTGATGACGTTGCAAACTGTATGGATCATAATGGTGATAGAAATGAACATGGTGGCATTGTTGCTGGTTCTAGACAGATATACTTAACTTTTCCAGCTGAAAGTACTTTTTCGGAGCGCGATGTTTTTAACTACTTCAACAAATTCGGGCCGGTCCATGACGTGAGAATTCCTTGTCAGCAAAAGAGAATGTTTGGATTTGTGACGTTTGTTTTTGCGGATACAGTTAGGCATATTTTAAACAAGGGAAATCCTCATTTTGTTAGTGGTGCACGTGTTTTGGTCAAACCATACCGTGAAAAGTATAAGGTTGATGAGAGGAAATATGGAGACACGTTTCAGCATCCTATGTACAACGGTTCTCGCTGTCTTGATACCGATTTTGGGCCACAATCATTGCCCTCAAGGTTAATCAAGAAACAGTTCATTGATGAACAAGAGCAAGCACTTGAATTTGAGAGATCCCGTTTCTCAGAGATGCGCTTATCAGCCGATCACCATAACCAAATGCCATTTTTTGGAAACTCACTCGAAGAATTGATGCTATCAGAAGGCAATGCTCATGCACAACATTCGGATTTCCCTTCAAATGAGCATTATAATTATCTTCTGGATGTTTTAAACAATGGTGCTGCCAACGAGGAAAACATCAGGCAGATCAATACCAAATACAAGGAGGAGAGTAGCCAGGGAGGACTGAATCTTCCAGACAGCCCGTTTGCATCTGCGTTAGGGGGTGAAATACCAACAGTTATATAG	1617	41.56	MDFSESTKVVYDRIQKIEPANVSKIIGYLLLQDHGEREMIRLAFGPDNLIHSLINNAKNHLQLPSNTTTSPDIPIHFTPFSPSPRHSPLTIQVPNRCCDPHGQPVDYAPMVHPSSFPEEYRLHNQLRFLSMEDHNESINSPDFSFGPRANRRSPSLPEFPFKVCHYFVKGFCRHGNNCRYMHPTESFSQIFSPNMSEEDHVFSPGSLEKLELELTELVKSRRGFPVSIASLPMLYYEKFGKILQAEGYLTESQRHGKAGYSLTKLLARLKSIVLIDRPHGQHAVVLADDVANCMDHNGDRNEHGGIVAGSRQIYLTFPAESTFSERDVFNYFNKFGPVHDVRIPCQQKRMFGFVTFVFADTVRHILNKGNPHFVSGARVLVKPYREKYKVDERKYGDTFQHPMYNGSRCLDTDFGPQSLPSRLIKKQFIDEQEQALEFERSRFSEMRLSADHHNQMPFFGNSLEELMLSEGNAHAQHSDFPSNEHYNYLLDVLNNGAANEENIRQINTKYKEESSQGGLNLPDSPFASALGGEIPTVI	538

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Aann4g01283	538	PANTHER	RNA-BINDING (RRM-RBD-RNP MOTIFS)	1	529	-	-
	Aann4g01283	538	SMART	c3hfinal6	160	184	IPR000571	GO:0046872(InterPro)
	Aann4g01283	538	FunFam	zinc finger CCCH domain-containing protein 53-like isoform X2	318	389	-	-
	Aann4g01283	538	ProSiteProfiles	Zinc finger C3H1-type profile.	158	185	IPR000571	GO:0046872(InterPro)
	Aann4g01283	538	ProSiteProfiles	OST-type HTH domain profile.	206	289	IPR025605	-
	Aann4g01283	538	ProSiteProfiles	Eukaryotic RNA Recognition Motif (RRM) profile.	311	386	IPR000504	GO:0003723(InterPro)
	Aann4g01283	538	SUPERFAMILY	CCCH zinc finger	161	183	IPR036855	GO:0046872(InterPro)
	Aann4g01283	538	Gene3D	-	159	241	-	-
	Aann4g01283	538	Pfam	Zinc finger C-x8-C-x5-C-x3-H type (and similar)	162	183	IPR000571	GO:0046872(InterPro)
	Aann4g01283	538	Gene3D	-	317	390	IPR012677	-
	Aann4g01283	538	SUPERFAMILY	RNA-binding domain, RBD	323	401	IPR035979	GO:0003676(InterPro)
	Aann4g01283	538	SMART	rrm1-1	312	382	IPR000504	GO:0003723(InterPro)
	Aann4g01283	538	Pfam	RNA recognition motif	323	370	IPR000504	GO:0003723(InterPro)

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Aann4g01283	-	-

Event-related genes

Select	Gene_1	Gene_2	Event_name
	549	Aann1g03549	Aann4g01283

Duplication type information

Select	Gene1	Location1	Gene2	Location2	Duplicated-type
	Aann	Aann-Chr4:67324751	Aann6g01185	Aann-Chr6:55060855	dispersed
	Aann	Aann-Chr5:24626628	Aann4g01283	Aann-Chr4:67324751	transposed
	Aann	Aann-Chr1:86110121	Aann4g01283	Aann-Chr4:67324751	wgd