Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Aann4g01295 | ATGGATCTTTCAAGATACTATCATTCAATGAATAAAAATTGCCAGAAGCCAGTTCGTAGTTCGGGTGAGATCCATGTGATTGTGGGACCCATGTTTGCTGGTAAAACAACTGCTCTTCTTCGTAGGATTAAATCTGAAGCAACTAATGGAAGGAATATAGCAATGATAAAGTCAAGCAAGGATAATCGATATGCAATAGATTCAGTTGTGACACATGATGGAACAAAGTATCCTTGTTGGGCACTTCCTGATTTGCTGTCTTTTAAACGAAGACTAGGGGAAGAAGCTTATGAAAAGCTGGATGTTATTGGGATTGATGAGGCACAATTTTTTGATGATCTCTATGACTTCTGTTCTAAAGCTGCTGATCATGATGGTAAAACTGTCATAATTGCTGGTCTTGATGGTGATTACTTAAGAAGGAACTTTGGTCCGGTTCTTGATATAGTACCACTTGCTGATACCATAACCAAGTTGACTGCTCGATGTGAAGTATGTGGTAAACGAGCCCATTTCACTTTTAGGAAGACCAACGAGACAAAAACAGAACTTATTGGCGGGGCAGATATGTATATGCCTGTTTGTCGTCAACATTATGTTAGTGGACAAACGGTGATTAAAAACACTAGACAAACAACCTCAACTACCACTGCTTAA | 657 | 38.96 | MDLSRYYHSMNKNCQKPVRSSGEIHVIVGPMFAGKTTALLRRIKSEATNGRNIAMIKSSKDNRYAIDSVVTHDGTKYPCWALPDLLSFKRRLGEEAYEKLDVIGIDEAQFFDDLYDFCSKAADHDGKTVIIAGLDGDYLRRNFGPVLDIVPLADTITKLTARCEVCGKRAHFTFRKTNETKTELIGGADMYMPVCRQHYVSGQTVIKNTRQTTSTTTA | 218 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Aann4g01295 | 218 | Gene3D | - | 160 | 201 | - | - | |
| Aann4g01295 | 218 | Pfam | Thymidine kinase | 22 | 199 | IPR001267 | GO:0004797(InterPro)|GO:0005524(InterPro) | |
| Aann4g01295 | 218 | Gene3D | - | 15 | 159 | IPR027417 | - | |
| Aann4g01295 | 218 | PANTHER | THYMIDINE KINASE | 15 | 213 | IPR001267 | GO:0004797(PANTHER)|GO:0004797(InterPro)|GO:0005524(InterPro)|GO:0046104(PANTHER) | |
| Aann4g01295 | 218 | ProSitePatterns | Thymidine kinase cellular-type signature. | 186 | 199 | IPR020633 | GO:0004797(InterPro)|GO:0005524(InterPro) | |
| Aann4g01295 | 218 | FunFam | Thymidine kinase | 160 | 202 | - | - | |
| Aann4g01295 | 218 | FunFam | Thymidine kinase | 18 | 159 | - | - | |
| Aann4g01295 | 218 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 22 | 160 | IPR027417 | - | |
| Aann4g01295 | 218 | SUPERFAMILY | Glucocorticoid receptor-like (DNA-binding domain) | 160 | 202 | - | - | |
| Aann4g01295 | 218 | PIRSF | Tdk | 19 | 214 | IPR001267 | GO:0004797(InterPro)|GO:0005524(InterPro) |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Aann4g01295 | K00857 | thymidine kinase [EC:2.7.1.21] |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Aann | Aann-Chr4:67465838 | Aann6g04735 | Aann-Chr6:143216392 | dispersed |