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AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aann4g01299 ATGGGCATAGCCAAGATCGCGTACCGAGCCAAACAAGGGTCTCGTGGTTGGGTGGCTTGGGCCATTAATCCAAACCAAATAGGTATGGTTGGGTCAGAGGCGATTGTGGCATTCCATAACAGTAATGGGAGTATAACGGTTTATCCAACATTGATAACAAGTTACAGCCCGTCAATGCTTCCTGGAGATCTTAGCTTTCGGGTTTCGGGTCTTTCGGCTGACTTTGTAAATGGTGAGATAACTATATATGCGACTGTGGGCCCATTTGTAGGAGGATCCCTTGTGAATCAAGTATGGCAAGCTGGGAATTTTGTTTTGAATGATGTACCGCAAATGCACGATGTTTCTCAGCAGAATCTACAATCAACAGGGGAACTTGATTTCTTGTCTGGTTAG 396 45.2 MGIAKIAYRAKQGSRGWVAWAINPNQIGMVGSEAIVAFHNSNGSITVYPTLITSYSPSMLPGDLSFRVSGLSADFVNGEITIYATVGPFVGGSLVNQVWQAGNFVLNDVPQMHDVSQQNLQSTGELDFLSG 131
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aann4g01299 131 ProSiteProfiles DOMON domain profile. 1 102 IPR005018 -
Aann4g01299 131 PANTHER CYTOCHROME B561 AND DOMON DOMAIN-CONTAINING PROTEIN 4 130 - -
Aann4g01299 131 Pfam Protein of unknown function (DUF568) 29 128 IPR045265 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aann4g01299 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Aann Aann-Chr4:9222513 Aann4g01299 Aann-Chr4:67532079 dispersed
Aann Aann-Chr4:67532079 Aann8g02741 Aann-Chr8:125929130 dispersed