AGRP
Asteraceae Genomic Research Platform
Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Aann4g01317 | ATGGGCATCACCGGAGAACTAGTTAGAAGTGTGTTCTCGAAAAATAAATCTTTCGGAACCACCCACGACACCAATGTGATGAGAAATAATGCAGTTGAAAGAAAGAGATGGACTTCTGTGAGATCATATCTTTGCGGTGATGAATTTAATTCTGTTTTAGCCGAAGAAGATTGCGCTTCTAGAAGAAGTGATAAAACAGCCCTGAGTTCGGTTTTTGTTGCTGATTATTCTGGTTCTGCTAGAACATCAAAAGCTACTATTTTTAGCTCAAGAATTGAAGATGACTCGTCATCTATCAAGGGTTCAGAAGCAAGTGTCACACAGCATCTAGAACACGAGGAAAATACTACTTTGAGCTCGGAACACAACGCTGCAGTTGTCATTCAGACAGCATTTAGAAGTTTTATGGCAAGGCGTCGAATTCAAATACCTGAACCTGTGGATATTGGTGATCATGATCAAGAGTCGATAGCAACATCAATAGAAGTGCAAACTGGAAACTCGGTGGTGGAAGCTAGAGAGGTTAGCGAAAGTTTCACTCATCGTGTGCAGCAGCATCACAAGGGTACTAGAGCACAAACATTAAGGCTAAAGGAGGATTGGGACGATAGCACCCTGAGTAGCAACATATCGAAAATGAGGATTCAACATAGACTAGAGGCATCTACTAGACGTGAAAGAGCACTCGCCTATGCTTTCTCTCAACAGTTGAGGATATGCTCAAAGAAGAAACAAAATGTGAGATCCGGGAACGATTCAGAAGCAAACATGAGCTGGAGTTGGCTTGAGAGATGGATGGCAACCCGACAACACGACACTTCATTTGGGGACATAAGTAAACAATTTGAACAATTAAACGTGAATGAAAAACTAATGGTGCAAACTAGAGTTTTATCAGATTTAGCAGGGGAGGAGAAGGAAAGTTGTGGATCAAATGAAGTTTCTATGCGCTTTGATAATGTTTCTTTGAGCTCAAAATCAGGAGAAAAATCTTACTATAAACCCACTCGAAATAGACTTAAGGCTACAAGTGTCTCGAGGCGAAAAACATCACCAGCTTATGGTTTCAGTAAGGACTATTCTAAGGTGAACAAGCAAGGAGGACACAAAGAGATTAGAAGTGAAGATCAACAATAA | 1137 | 40.72 | MGITGELVRSVFSKNKSFGTTHDTNVMRNNAVERKRWTSVRSYLCGDEFNSVLAEEDCASRRSDKTALSSVFVADYSGSARTSKATIFSSRIEDDSSSIKGSEASVTQHLEHEENTTLSSEHNAAVVIQTAFRSFMARRRIQIPEPVDIGDHDQESIATSIEVQTGNSVVEAREVSESFTHRVQQHHKGTRAQTLRLKEDWDDSTLSSNISKMRIQHRLEASTRRERALAYAFSQQLRICSKKKQNVRSGNDSEANMSWSWLERWMATRQHDTSFGDISKQFEQLNVNEKLMVQTRVLSDLAGEEKESCGSNEVSMRFDNVSLSSKSGEKSYYKPTRNRLKATSVSRRKTSPAYGFSKDYSKVNKQGGHKEIRSEDQQ | 378 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Aann4g01317 | 378 | ProSiteProfiles | IQ motif profile. | 121 | 148 | - | - | |
| Aann4g01317 | 378 | Pfam | IQ calmodulin-binding motif | 122 | 141 | IPR000048 | GO:0005515(InterPro) | |
| Aann4g01317 | 378 | MobiDBLite | consensus disorder prediction | 363 | 378 | - | - | |
| Aann4g01317 | 378 | MobiDBLite | consensus disorder prediction | 324 | 351 | - | - | |
| Aann4g01317 | 378 | PANTHER | IQ-DOMAIN 5-RELATED | 182 | 343 | - | - | |
| Aann4g01317 | 378 | MobiDBLite | consensus disorder prediction | 324 | 378 | - | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Aann4g01317 | - | - |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Aann | Aann-Chr4:67983840 | Aann3g03674 | Aann-Chr3:139691050 | dispersed | |
| Aann | Aann-Chr4:67983840 | Aann2g00207 | Aann-Chr2:12699722 | transposed |
| Select | Gene | Event_type | S_start | S_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|---|
| Aann1g00131 | . | 1 | 444 | IQD Protein family | AT3G49260 | 47.473 | 2.37e-95 | 293.0 | |
| Aann1g01083 | ACH | 1 | 450 | IQD Protein family | AT5G03040 | 51.762 | 1.25e-132 | 387.0 | |
| Aann1g02151 | ACH | 1 | 517 | IQD Protein family | AT3G59690 | 49.825 | 5.09e-151 | 441.0 | |
| Aann1g03715 | . | 1 | 353 | IQD Protein family | AT3G16490 | 51.145 | 2.65e-86 | 265.0 | |
| Aann1g03824 | . | 1 | 414 | IQD Protein family | AT1G72670 | 43.4 | 4.65e-90 | 276.0 | |
| Aann1g04893 | . | 1 | 571 | IQD Protein family | AT1G18840 | 35.897 | 8.84e-78 | 251.0 | |
| Aann1g06093 | ACH | 1 | 575 | IQD Protein family | AT1G74690 | 38.567 | 1.46e-80 | 261.0 | |
| Aann1g06303 | . | 5 | 100 | IQD Protein family | AT3G51380 | 50.0 | 1.48e-28 | 99.8 | |
| Aann1g07140 | ACH | 1 | 269 | IQD Protein family | AT3G52290 | 41.489 | 2.27e-48 | 167.0 | |
| Aann2g00207 | . | 1 | 237 | IQD Protein family | AT3G15050 | 45.238 | 6.00e-64 | 200.0 | |
| Aann2g01058 | . | 1 | 443 | IQD Protein family | AT5G13460 | 43.527 | 4.78e-99 | 300.0 | |
| Aann2g03698 | . | 1 | 353 | IQD Protein family | AT3G16490 | 53.944 | 7.10e-102 | 305.0 | |
| Aann2g03928 | ACH | 57 | 234 | IQD Protein family | AT3G15050 | 53.371 | 3.31e-64 | 198.0 | |
| Aann3g00949 | ACH | 163 | 246 | IQD Protein family | AT5G03040 | 67.857 | 2.91e-34 | 120.0 | |
| Aann3g01372 | ACH | 1 | 554 | IQD Protein family | AT1G74690 | 41.062 | 4.32e-87 | 279.0 | |
| Aann3g03185 | . | 7 | 360 | IQD Protein family | AT5G07240 | 40.299 | 2.26e-40 | 145.0 | |
| Aann3g03674 | ACH | 1 | 393 | IQD Protein family | AT5G03040 | 39.815 | 1.05e-80 | 256.0 | |
| Aann3g03731 | . | 118 | 534 | IQD Protein family | AT4G00820 | 37.237 | 5.13e-56 | 190.0 | |
| Aann3g04577 | ACH | 1 | 450 | IQD Protein family | AT5G03040 | 47.458 | 6.29e-119 | 353.0 | |
| Aann3g05333 | ACH | 102 | 575 | IQD Protein family | AT1G74690 | 41.494 | 1.65e-79 | 259.0 | |
| Aann4g01055 | ACH | 2 | 240 | IQD Protein family | AT3G15050 | 44.444 | 9.72e-70 | 214.0 | |
| Aann4g01317 | . | 1 | 401 | IQD Protein family | AT5G35670 | 42.005 | 8.70e-79 | 247.0 | |
| Aann4g02569 | . | 11 | 534 | IQD Protein family | AT4G00820 | 52.857 | 6.43e-155 | 451.0 | |
| Aann4g03642 | ACH | 1 | 374 | IQD Protein family | AT4G14750 | 48.049 | 8.24e-91 | 276.0 | |
| Aann4g04528 | . | 1 | 375 | IQD Protein family | AT5G03960 | 29.101 | 2.20e-21 | 91.7 | |
| Aann4g04653 | ACH | 1 | 353 | IQD Protein family | AT3G16490 | 46.684 | 1.29e-66 | 214.0 | |
| Aann5g02898 | . | 11 | 534 | IQD Protein family | AT4G00820 | 42.5 | 3.19e-117 | 354.0 | |
| Aann5g05379 | . | 1 | 794 | IQD Protein family | AT1G19870 | 34.441 | 1.26e-102 | 333.0 | |
| Aann6g00229 | . | 1 | 413 | IQD Protein family | AT2G26180 | 57.399 | 1.05e-143 | 415.0 | |
| Aann6g00619 | ACH | 3 | 331 | IQD Protein family | AT5G07240 | 32.727 | 1.03e-30 | 120.0 | |
| Aann6g01463 | ACH | 1 | 457 | IQD Protein family | AT5G03040 | 45.806 | 1.49e-112 | 335.0 | |
| Aann6g02548 | ACH | 291 | 669 | IQD Protein family | AT2G43680 | 45.833 | 4.90e-87 | 283.0 | |
| Aann6g03247 | ACH | 1 | 482 | IQD Protein family | AT4G23060 | 38.306 | 2.64e-58 | 196.0 | |
| Aann6g03815 | . | 1 | 392 | IQD Protein family | AT3G22190 | 54.975 | 2.82e-118 | 348.0 | |
| Aann7g00054 | . | 208 | 794 | IQD Protein family | AT1G19870 | 35.849 | 3.77e-80 | 269.0 | |
| Aann7g01969 | . | 109 | 330 | IQD Protein family | AT3G16490 | 40.773 | 2.83e-35 | 131.0 | |
| Aann7g03045 | ACH | 1 | 382 | IQD Protein family | AT4G14750 | 45.433 | 9.00e-84 | 258.0 |