Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Aann4g01320 | ATGCCACCATTAAAAACCATATATCTAACCATCATATTCATTTTAATAATCCCATACCCAACAACAACTGGTGATCAATCCTATATCTCAATCTTAATAACCCAAAAGGGTCTTAATTTCACCAAAGATTTACTCATATCAAAAGCAATATCATCACTTACACCAACACCAATACCTGAAATTGTTAAAAATGTTAAGATACCTTTGATTGGTAAAGTGCATGTTGTTCTTAAGGATATTAGTATTAATGGGGTTGAAGTTGGGTCATCTGATGTTGTGCCTAGTGTTGGTGGTGTTGTGATTGTTGGTAATGGTGTTAGTTGTGAGTTGGAGGTGAAGTGGCATTATAGTTATGGGACTTGGGTTGGTCCGGTTTCGGTTTCGGATAGTGGGACTGCTTCTATTAAGGTTGATGGCATGGAAATCAGTGTAACACTAGACATGGTTAATAAAGAAGGATCTATGAAACTTTCCATCGTGGAATGTAATTGTCATATAAATGATATCTCCATAGACTTGGATGGAGGAGCATCTTGGCTCTATCAAGGGATTGTGGATGCTTTTGAAGATGAAATAGTCTCAGCAGTAGAAAAAGCAATTACCAAGAAACTGAAAGCCGGAATTTCACACCTTGAATCAATTTTACAAACTCTTCCGAAACAAATTCCAGTGGATGATACTGCCTCATTAAATGTTACATTTGTTAACAACCCTTATATGAGCGACACTTCACTAGGCGTTGAGATAAATGGGTTGTTTGTAGAAAATAAAACCCACGCACATTCGTACCACAATGGTTTGCAGCCACCAGTTTCATGTTCAGAATCTTCAAAGATGATTGGAATTGCCTTAGATGAAGCTGTTTTTAAATCTGCATCTGCCTTATACTATAACGCCAAGTTTATGCACTGGATTGTGGATAAAATTCCCCAACAATCTATATTGAACACAGCAGGATGGAGATTTATTGTGCCTCAACTTTACAAGAAATACCCGAATGCTGATATGAATTTGGACATTACACTGTCTGATCCTCCGGTTATGCAGATATCATGGCAGAAAATTGGTGCAATCGTCTATGCAGACTTAATTATAGATGTTCTTGAAGGCGATGACACAATACCTGTTGCTTGTATCTCACTGGTAATTGCTGGCACGGGTTCAGTTGAAATTGTAGGAAACAACCTTGCGAGTCATGTGAATTTGGATGATTTCACCATGTCGTTGAAATGGAGCAAGATTGGCACCTTGCACATGTTTCTTATTCAGCCAGTGATGTGGACGATCATTGAAACGGTTTTCTTGCCATATGTGAATGCACAACTTGGGGTTGGCTTCCCGTTGCCTATAATACGTGGTTTTATGCTACAAAATGCTGAGATAATACCCTCAGATTCAAGAATCACGGTCTGCAGTGACGTTGCTTATGAGGAATATGTTGATAATAGCCGATCCCTCGTTTACACTTCATGA | 1473 | 38.56 | MPPLKTIYLTIIFILIIPYPTTTGDQSYISILITQKGLNFTKDLLISKAISSLTPTPIPEIVKNVKIPLIGKVHVVLKDISINGVEVGSSDVVPSVGGVVIVGNGVSCELEVKWHYSYGTWVGPVSVSDSGTASIKVDGMEISVTLDMVNKEGSMKLSIVECNCHINDISIDLDGGASWLYQGIVDAFEDEIVSAVEKAITKKLKAGISHLESILQTLPKQIPVDDTASLNVTFVNNPYMSDTSLGVEINGLFVENKTHAHSYHNGLQPPVSCSESSKMIGIALDEAVFKSASALYYNAKFMHWIVDKIPQQSILNTAGWRFIVPQLYKKYPNADMNLDITLSDPPVMQISWQKIGAIVYADLIIDVLEGDDTIPVACISLVIAGTGSVEIVGNNLASHVNLDDFTMSLKWSKIGTLHMFLIQPVMWTIIETVFLPYVNAQLGVGFPLPIIRGFMLQNAEIIPSDSRITVCSDVAYEEYVDNSRSLVYTS | 490 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Aann4g01320 | 490 | CDD | BPI2 | 279 | 474 | - | - | |
| Aann4g01320 | 490 | SMART | bpi2-2 | 274 | 472 | IPR001124 | GO:0008289(InterPro) | |
| Aann4g01320 | 490 | SMART | bpi1-3 | 33 | 258 | IPR017942 | GO:0008289(InterPro) | |
| Aann4g01320 | 490 | SUPERFAMILY | Bactericidal permeability-increasing protein, BPI | 245 | 476 | IPR017943 | GO:0008289(InterPro) | |
| Aann4g01320 | 490 | PANTHER | OS06G0309200 PROTEIN | 11 | 484 | IPR045897 | - | |
| Aann4g01320 | 490 | FunFam | phospholipid transfer protein-like | 36 | 216 | - | - | |
| Aann4g01320 | 490 | Pfam | LBP - BPI - CETP family, C-terminal domain | 260 | 476 | IPR001124 | GO:0008289(InterPro) | |
| Aann4g01320 | 490 | PIRSF | Lipid-binding-protein | 6 | 481 | IPR030675 | GO:0005615(InterPro)|GO:0008289(InterPro) | |
| Aann4g01320 | 490 | Gene3D | - | 31 | 462 | - | - | |
| Aann4g01320 | 490 | SUPERFAMILY | Bactericidal permeability-increasing protein, BPI | 30 | 241 | IPR017943 | GO:0008289(InterPro) | |
| Aann4g01320 | 490 | Gene3D | - | 36 | 216 | - | - | |
| Aann4g01320 | 490 | Pfam | LBP - BPI - CETP family, N-terminal domain | 37 | 211 | IPR017942 | GO:0008289(InterPro) |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Aann4g01320 | K05399 | lipopolysaccharide-binding protein |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Aann | Aann-Chr4:68072104 | Aann5g00696 | Aann-Chr5:18809209 | dispersed |