AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aann4g01327 ATGGACGTACTATTCAAATCAATAAACGTCCGAGACCTCCTCCCCTCCCACGACCTCGACGACACCTCCCCCCTCTCCGCCCCAGACCTCCGTCTCCTAATCGACCGCCTCAACCTCCACTCCCTCCACATCAAATCCAAAGTCCAAAACTACGTCGTTTCACACAACCCCGAATTCCTCACCCTCTTCCAACACTGCTCCGATTCCGTCACCAATTCACACAACCTCTCCGAAAAAGCCGCTGATCTTGTTACGCGGTTAGGTGATAACGGATTTGAGAATGTGGAGAGGATTGTGGATGAGATTAGGGTTAGGAGAGGCGAGATGAGGGAGAAGAAGGAGGTGATGGAGGTGGTTGGTGTGGTGGTGAGGATGAGTGAGGGTTTGAGTGGGGTGGAGGGGGATTTGGGGTGTGGGAGGTTTGTTGAGGCTGCGGAGGCGGTTACGGAGATGAAATTGGCGTTGCGTGTGGGGGATGGGGATGGTGCGGGTGAGGCGAGGGAGCCGGTCGTGTTTGGTTTGTTGAGGAAGAAATGGGCCGATTGTTTTGATAAGATACAAGAGGTGTTAGTGAAGTTTATTGAGAATGCGGTGAGATTTGATCAGCAGTCTAATGCGGTTTATGTGAAGAATAAGATGGATGTGAATGACATTAAAGGTGCTGAGTTATGTACTGTTTTGAAAGCAATGGATGTAGTTGGTATTCTAGATTATGGACTTGCTAAAGTAGCGGACTTAATGATGAAACATGTGATAGCTCCTGCAGTGCGATCTGGTTCCCATAGTTTTGCTGTAGAAGAGCAAAGATCAGATTCAGGGTATATAACTGATGTAGCTTTGAGGATAACGCCGCCTTCTGGTACCCAGATTGAGAAAATGGATGCTGAAACTATTTATTCTGGAATAAAAGTGATCATTCAATTTATCTTCAACCATATTTGCTTTCAAAATTCTTCCTGGATGCAACTATTTGGAAGATTGACATGGCCGCAGATGGCGGAATTGATTATTTCAAACTTTCTCTCCAAGATCGTTCCCGATGATGCTTCCAAACTTGCTGACTTCCAAACGATAAGACAACTTACTTCTGAGTTTGAGACATCTCTTAAAGAAGTTATGTTCATTTCCTCTGGCAAAGATGAAAGGTTGACCAATTTTGCTGACAATGTTGAAGTTCACTTTGCAACAAGGAAGAAGGTTGAGATTTTAGCAACAGCTAGAGACCTTCTTCTACATTCAGATTTTAAGCTCCCCAAGGATTATTCAAGGAAAAGTGCAGTCTCTAAAAATAGTGGGAATGTGGACTTGCTTTTCTCGTCTGAAAGGTGTGTCATATCCGAAGCAGCTGCTCAACTAATGGAAGTTGTGCATCCAACACTGAAGGATGTTTGCTTGTCATCTGCAACAGTGGCTTTAGAATTCTATCATGCTGCTAGGGATGCTTTACTTCTTTATGAAGCTGTTATTCCTGTCAAGCTAGAAAGACAGCTGGATGGTATCAACCAGGTTGCAGTTTTAATTCATAATGATTGCCTATTTCTATCACAGGAGATTCTTGGCCTTATATTTGAGTATCAATCAGACTTCCCAACTTCCATTAAGGGAGCTGTATTTATTGATTTGGGTGTAAGATACAAGTTGATGGCAGAAGAGATATTACAAAGACAAATACAGCTTGTTAAGCATAATCTGATGGAGGCCATAGATGGTGCCGATGGATTTCAGAATACCCATCAACCAAAGCGATATGAATCTGCAAAGTTCAGCATTGATCAGGTAGCTTTCATTCTTGAGAAAGTGCACATAATATGGGAGCCACTGCTACTACCCTTGACATATAAAGGAAGCATGTGCACGGTCTTGGAGGCTGTATGCTCCAGAATGACCAAAGACATACTTCTTCTAGATGACATTGCAGCAGAAGAAACATTACAGATCCAAAGACTGATTCATATGCTGCTCGAAAACCTTTCTTCTTTATTGGAATCTTTGGTTGCTATTAATGACACAACGAAACCACAAAAGGCATCGTCAGGCTTTATTGATGACCTCATACCATCACTCCCACGACTACGCATACTTGCAGATATGCTGGACATGCCTCTGAAATCCATCACTGCATCTTGGGAAAGTGGGGAGCTGGCGAAACACGGTTATACTTCGTTAGAGGTGAGTGACTTTATTAGAGCAATATTTACAGATTCACCCCTAAGGAAAGAATGCCTGTGGAGAATCGAAAATATCAGTTTTTAG 2253 43.28 MDVLFKSINVRDLLPSHDLDDTSPLSAPDLRLLIDRLNLHSLHIKSKVQNYVVSHNPEFLTLFQHCSDSVTNSHNLSEKAADLVTRLGDNGFENVERIVDEIRVRRGEMREKKEVMEVVGVVVRMSEGLSGVEGDLGCGRFVEAAEAVTEMKLALRVGDGDGAGEAREPVVFGLLRKKWADCFDKIQEVLVKFIENAVRFDQQSNAVYVKNKMDVNDIKGAELCTVLKAMDVVGILDYGLAKVADLMMKHVIAPAVRSGSHSFAVEEQRSDSGYITDVALRITPPSGTQIEKMDAETIYSGIKVIIQFIFNHICFQNSSWMQLFGRLTWPQMAELIISNFLSKIVPDDASKLADFQTIRQLTSEFETSLKEVMFISSGKDERLTNFADNVEVHFATRKKVEILATARDLLLHSDFKLPKDYSRKSAVSKNSGNVDLLFSSERCVISEAAAQLMEVVHPTLKDVCLSSATVALEFYHAARDALLLYEAVIPVKLERQLDGINQVAVLIHNDCLFLSQEILGLIFEYQSDFPTSIKGAVFIDLGVRYKLMAEEILQRQIQLVKHNLMEAIDGADGFQNTHQPKRYESAKFSIDQVAFILEKVHIIWEPLLLPLTYKGSMCTVLEAVCSRMTKDILLLDDIAAEETLQIQRLIHMLLENLSSLLESLVAINDTTKPQKASSGFIDDLIPSLPRLRILADMLDMPLKSITASWESGELAKHGYTSLEVSDFIRAIFTDSPLRKECLWRIENISF 750
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aann4g01327 750 Pfam ZW10 C-terminal helical domain 589 745 - -
Aann4g01327 750 PANTHER CENTROMERE-KINETOCHORE PROTEIN ZW10 4 747 - GO:0006888(PANTHER)|GO:0007094(PANTHER)|GO:1990423(PANTHER)
Aann4g01327 750 Pfam Centromere-kinetochore protein zw10, middle domain 175 410 IPR048344 -
Aann4g01327 750 Pfam Centromere-kinetochore protein zw10, C-terminal 438 566 IPR048343 -
Aann4g01327 750 Gene3D - 543 749 IPR046362 -
Aann4g01327 750 Pfam Centromere-kinetochore Zw10 N-terminal 39 129 IPR009361 GO:0000278(InterPro)|GO:0000775(InterPro)|GO:0005634(InterPro)
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aann4g01327 K11578 protein transport protein DSL1/ZW10