Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Aann4g01351 | ATGATCAAGCAATTTCTTAAAAAGATTCCCAAGAAATCATCCTCAAAATCATCACACCATAATGATGAAATACCCGATTCTAGCTCGAATAAGGCGAATATTTCGAGTGTTAAGTCTAGTGAAGTGGTGCAGATAGTTAATGAAGCTTCTTATGAAGCTTTGCCTAGTTTTCGAGACGTATCAAGTTCCGAAAAGCATAGTTTGTTTATCAAGAAAATGAGTATGTGTTGTGTAGTGTTTGATTTTAACGACCCGTTAAAGAGTTCAAAAGAAAAAGACGTAAAGAAACAAACTTTACTTGAACTAGTTGAATATGTTTCTTCAGTAAGTTCCAAGTTTAATGAGGTTACAATGTTGGAGATAACGAAAATGGTGTCTGCTAATTTGTTTCGGTCATTACCTAACTTAAGTAATGAAAGTAAGCTGCCGGATATATATGATCAAGAAGATGACGAGTTTGTTATGGATCCTTCATGGCCACATCTTCAAGTTGTGTACGAGTTTTTGCTTAGGTTTGTGGCCTCATCAGAGACTGATGCTAAAATTGCGAAAAAGTATATAGATCAGTCTTTCGTGTTAAAGTTGCTTGATCTTTTTGATTCTGAGGATCAAAGGGAAAGGGAGTATTTAAAGACGATTATGCATAGGATTTATGGCAAGTTTATGGTTCATCGGCCGTTTATTAGAAAAGCTATTAATAATATATTTTATCATTTTATTCTTGAGAGTGGTAAGCATAACGGGATAGCGGAAATACTTGAGCTTTTAGGTAGTATAATCAATGGATTTACGATGCCATTGAAGGAAGAACATAAGGTGTTTCTTGTTCGTGTGTTGATTCCGCTTCATAAGCCTAGGTATTTGTCTATGTATCAGCAGCAACTTGTGTATTGTGTCAGTCAGTTTGTTGAAAAAGATTGTAAATTAGCTGATACGGTGATTAGGGGGCTGTTAAAGTATTGGCCTGTGACAAATAGTTCTAAAGAAGTGATGTATCTGAGTGAATTGGAGGAAATTCTTGAAGTTACAAAGGCTGCGGAATTTGAAAAGTGTATGGTTCCTTTGTTTCGTCAGATTGGTCATTGCCTCAATAGTCCACATTTTCAGGTAGCAGAACGTGCATTATTCCTATGGAATAACGAGCATATAAGGAATCTAATAATTAAAAACCGCAAGGTGATTCTGCCCCTCATCTTCTCCCCTTTGGAGAAAAACACAAAAGCTCATTGGAACCAAGCCGTTCAAACCCTAACCGTAAATGTCAGGAAAGTATTCTCAGATTTTGATCAGTCATTATTCCAAGATTGTCTGGTCAGCTATCAAGAACACGAAACCAAGGTAAAGGAAAGCCTTGCAAAGCGACAGATGACTTGGAACCGCCTTGATGCCTTAGCAGCCTCCAAAACCAAGCCTATAGTCATCTCGATGTTTGCCTCACCTGTGACTATGACGACCACCACTGCAGTAAAATGA | 1473 | 37.41 | MIKQFLKKIPKKSSSKSSHHNDEIPDSSSNKANISSVKSSEVVQIVNEASYEALPSFRDVSSSEKHSLFIKKMSMCCVVFDFNDPLKSSKEKDVKKQTLLELVEYVSSVSSKFNEVTMLEITKMVSANLFRSLPNLSNESKLPDIYDQEDDEFVMDPSWPHLQVVYEFLLRFVASSETDAKIAKKYIDQSFVLKLLDLFDSEDQREREYLKTIMHRIYGKFMVHRPFIRKAINNIFYHFILESGKHNGIAEILELLGSIINGFTMPLKEEHKVFLVRVLIPLHKPRYLSMYQQQLVYCVSQFVEKDCKLADTVIRGLLKYWPVTNSSKEVMYLSELEEILEVTKAAEFEKCMVPLFRQIGHCLNSPHFQVAERALFLWNNEHIRNLIIKNRKVILPLIFSPLEKNTKAHWNQAVQTLTVNVRKVFSDFDQSLFQDCLVSYQEHETKVKESLAKRQMTWNRLDALAASKTKPIVISMFASPVTMTTTTAVK | 490 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Aann4g01351 | 490 | PIRSF | PP2A-B56 | 3 | 488 | IPR002554 | GO:0000159(InterPro)|GO:0007165(InterPro)|GO:0019888(InterPro) | |
| Aann4g01351 | 490 | SUPERFAMILY | ARM repeat | 67 | 446 | IPR016024 | - | |
| Aann4g01351 | 490 | MobiDBLite | consensus disorder prediction | 1 | 35 | - | - | |
| Aann4g01351 | 490 | FunFam | Serine-threonine protein phosphatase 2A regulatory subunit | 61 | 464 | - | - | |
| Aann4g01351 | 490 | PANTHER | SERINE-THREONINE PROTEIN PHOSPHATASE 2A PP2A REGULATORY SUBUNIT B | 8 | 469 | IPR002554 | GO:0000159(InterPro)|GO:0007165(InterPro)|GO:0019888(InterPro) | |
| Aann4g01351 | 490 | Gene3D | - | 62 | 463 | IPR011989 | - | |
| Aann4g01351 | 490 | Pfam | Protein phosphatase 2A regulatory B subunit (B56 family) | 54 | 465 | IPR002554 | GO:0000159(InterPro)|GO:0007165(InterPro)|GO:0019888(InterPro) |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Aann4g01351 | K11584 | serine/threonine-protein phosphatase 2A regulatory subunit B' |
| Select | Gene_1 | Gene_2 | Event_name |
|---|---|---|---|
| 532 | Aann1g03492 | Aann4g01351 |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Aann | Aann-Chr1:85302988 | Aann4g01351 | Aann-Chr4:69122197 | dispersed | |
| Aann | Aann-Chr3:161978238 | Aann4g01351 | Aann-Chr4:69122197 | dispersed | |
| Aann | Aann-Chr4:69122197 | Aann5g05453 | Aann-Chr5:179951137 | dispersed | |
| Aann | Aann-Chr4:69122197 | Aann3g05475 | Aann-Chr3:161967596 | transposed |