Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Aann4g01356 | ATGGCTACAAGTTCAGAAATTGGGCTTGCAGCAGCTATAAACATCCTCACTGCATTTGCGTTTTTGGTTGCGTTTGCTATACTGCGTATCCAGCCGTTCAATGATAGAGTTTATTTTCCAAAATGGTATTTAAAGGGGTTAAGAAACAACCCACTTCAGTCGGGTGCATTTGTGCAGAAGTTTGTAAACTTGGATTTCAGATCATACTTGAGGTTTCTGAACTGGATGCCGGCTGCTTTGCGTATGCCGGAACCAGAGCTTATTGATCATGCTGGATTGGATTCCGTTGTTTACTTGAGAATTTACTTGACCGGGCTCAAAATTTTTGTTCCGATTGCATGCCTTGCTTTCACGGTCATGGTGCCAGTCAATTGGACTAATCGGACTTTAGAGGAGTCTAAACTAACATTCAGTGACATAGACAAGCTTTCAATATCCAACATTCCCAAAGGTTCAAACAGGTTCTTTACCCATTTAGTCATGGCTTACGCCTTTACGTTTTGGACCTGTTATATTTTAAAAAGAGAGTACGAGATAGTTGCAAAAATGAGGTTGCATTTTATTGCATCAGAACAACGACGGCCTGATCAATTTACTGTGCTAGTGAGAAACGTGCCCCCAGACCCTGATGAGACAGTCAATGAACTTGTGGAGCATTTTTTTCTAGTCAACCATCCGGATCAATATTTATCTCACCAGGTTGTTTATAACGCAAACATACTCTCTAAGTTGGTGAATGAGAAGAAAACAAAGAGGAATTGGCTTGACTATTATCAGCTGAAATATGATAGAAGTAACAAGTCAAAAAGACCATTGATGAAGACTGGTTATCTTGGCCTGTTCGGGAAAAGTGTTGATGCTATTGATTTTTATCAATCTGAGATTGAGAAGCTATTGAAGGAGATATCTAAAGAGAGGGAAAAGATTATAACAAGCTCCAAATATGTTATGCCGGCTGCATTTGTTTCTTTTAAATCAAGATGGGGTGCTGCAGTTTGTGCACAAACTGAACAATCCAGGAACCCAACCGTTTGGCTAACCGAGTGGGCCCCAGAACCCCGTGATGTTTATTGGGATAATCTTGCCATTCCATTTGTTTCACTCACAGTTAGAAGACTTATAATTGCTGTGGCATTTTTCTTCCTTACATTTTTCTTCATGATCCCGATAGCCTTTGTACAGTCACTTGCAAATATTGATGGAATAGTGAAAGCAGCTCCTTTTATGCGAGGCATTATGGAAGTGGAATTTGTCAAGTCTTTCATTCAAGGTGTTATGCCGGGAATTGCTCTGAAGATATTCCTCATCTTTTTACCTTCAATCTTGATGATGATGTCTAAGTTTGAAGGGTTTACCTCTATATCGGCTCTAGAGAGAAGATCTGCATCAAGATATTATATTTTTCAATTTATCAATGTCTTTCTTGGGAGCATAATCACTGGGACTGCATTTCAACAGCTAAATACATTTATCCACCAGCCTGCAAACACTATCCCAGTGACAATTGGTGCATCTATACCGATGAAAGCAACCTTTTTTATAACTTATATCATGGTCGACGGATGGGCTGGAGTTGCTGGGGAGATTCTGAGGTTAAAACCACTAATATTCTATCACCTAAAGAATTTTTTCTTGGTAAAAACCGAAAAAGATAGGGAAGAAGCAATGAACCCTGGAAGTTTATCATTCAACACGGGTGAACCTCAAATCCAGCTTTATTTCTTACTTGGCCTTGTTTATGCTGTTGTCACCCCGATTCTGCTTCCTTTTATAGTCGTATTCTTTGGGCTGGCTTACGTTGTATACCGTCATCAGATTATAAATGTGTATAATCAGCAGTATGAAAGTGCAGGATCTTTCTGGCCAGACGTTCATGGCCGTATTATCACTGCATTGATCGTTTCACAGTTGCTTCTAATGGGTTTGCTTAGCACTAAAGAAGCTGCCCAGTCAACTCCATTGCTTATCGCACTCCCTGTGCTAACCATATGGTTTCATAGATTCTGTAAGGGGCGGTACGAACCAGCTTTTATTAGGTTCCCTTTACAGGAGGCCATGATCAAAGACACACTAGAACGTGCAAGGGAGCCGTGCCTAAACGTGAAAGCCTACTTAGAAAATGCATATGTTCACCCAGTATTTTACAATGAAGACAGATGGGACGGTAGTGATGATGGGATCAGTGATGAGGAGTCGCAGAAAGAACCTCCTCTGGTCGCCACAAAGCGCCCTTCACGAACAAACACACCAGCAAGAAGTCAAAGAAGTGAGTCTACGCGAACCTTGTTGAGTGTCACAGACGAAAGATCTTGCCCGTAA | 2319 | 40.97 | MATSSEIGLAAAINILTAFAFLVAFAILRIQPFNDRVYFPKWYLKGLRNNPLQSGAFVQKFVNLDFRSYLRFLNWMPAALRMPEPELIDHAGLDSVVYLRIYLTGLKIFVPIACLAFTVMVPVNWTNRTLEESKLTFSDIDKLSISNIPKGSNRFFTHLVMAYAFTFWTCYILKREYEIVAKMRLHFIASEQRRPDQFTVLVRNVPPDPDETVNELVEHFFLVNHPDQYLSHQVVYNANILSKLVNEKKTKRNWLDYYQLKYDRSNKSKRPLMKTGYLGLFGKSVDAIDFYQSEIEKLLKEISKEREKIITSSKYVMPAAFVSFKSRWGAAVCAQTEQSRNPTVWLTEWAPEPRDVYWDNLAIPFVSLTVRRLIIAVAFFFLTFFFMIPIAFVQSLANIDGIVKAAPFMRGIMEVEFVKSFIQGVMPGIALKIFLIFLPSILMMMSKFEGFTSISALERRSASRYYIFQFINVFLGSIITGTAFQQLNTFIHQPANTIPVTIGASIPMKATFFITYIMVDGWAGVAGEILRLKPLIFYHLKNFFLVKTEKDREEAMNPGSLSFNTGEPQIQLYFLLGLVYAVVTPILLPFIVVFFGLAYVVYRHQIINVYNQQYESAGSFWPDVHGRIITALIVSQLLLMGLLSTKEAAQSTPLLIALPVLTIWFHRFCKGRYEPAFIRFPLQEAMIKDTLERAREPCLNVKAYLENAYVHPVFYNEDRWDGSDDGISDEESQKEPPLVATKRPSRTNTPARSQRSESTRTLLSVTDERSCP | 772 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Aann4g01356 | 772 | MobiDBLite | consensus disorder prediction | 742 | 772 | - | - | |
| Aann4g01356 | 772 | Pfam | Calcium-dependent channel, 7TM region, putative phosphate | 371 | 643 | IPR003864 | GO:0016020(InterPro) | |
| Aann4g01356 | 772 | Pfam | Cytosolic domain of 10TM putative phosphate transporter | 197 | 360 | IPR027815 | - | |
| Aann4g01356 | 772 | PANTHER | PROBABLE MEMBRANE PROTEIN DUF221-RELATED | 10 | 727 | IPR045122 | GO:0005227(PANTHER)|GO:0005227(InterPro)|GO:0005886(PANTHER) | |
| Aann4g01356 | 772 | MobiDBLite | consensus disorder prediction | 724 | 772 | - | - | |
| Aann4g01356 | 772 | Pfam | Late exocytosis, associated with Golgi transport | 9 | 176 | IPR032880 | - | |
| Aann4g01356 | 772 | Coils | Coil | 288 | 308 | - | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Aann4g01356 | K21989 | calcium permeable stress-gated cation channel |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Aann | Aann-Chr4:69255286 | Aann8g01061 | Aann-Chr8:48243930 | dispersed | |
| Aann | Aann-Chr6:6794058 | Aann4g01356 | Aann-Chr4:69255286 | transposed | |
| Aann | Aann-Chr7:121609160 | Aann4g01356 | Aann-Chr4:69255286 | transposed | |
| Aann | Aann-Chr8:134061512 | Aann4g01356 | Aann-Chr4:69255286 | transposed | |
| Aann | Aann-Chr4:69255286 | Aann6g02630 | Aann-Chr6:76359319 | wgd |