AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aann4g01357 ATGGAGGAGGTGATGACGTTAGCGGATGCAGCGTACCATGCTAACAAGGTGATCACAGCTGTGACACCATCGTCCTCAAGAGGTCCAGTCATGTTGTTGTATAGTGTTCCTTTGTTATCAGCGTTACTTGCCTTTGCTATTGCTCAGTTTCTTAAAGTCATTACTACTTGGTATAAGGAAAAGAGATGGGATCCTAAAAAGATTGTCGGCTCTGGTGGAATGCCATCATCTCATTCTTCAACTGTTGTGGCACTTGCAGTATCTATTGGTCTACACGAGGGAATTGATTCTTCATCGTTTGCAATTGCTGTTGTCATGGCTTTTATTGTTATGTATGATGCAACTGGAGTCAGACTCCATGCTGGTCGCCAAGCTGAAGTGTTGAACCAGATAGTGTGTGAATTTCCTCCGGAGCACCCTTTATCCACATCCATACCTCTACGTGATTCGCTTGGGCATACTCCATTACAGGTGGTTGCAGGGGCCATGCTAGGATGCATAGTGGCATTCCTGATGAAAGCAACTGACTAG 531 45.2 MEEVMTLADAAYHANKVITAVTPSSSRGPVMLLYSVPLLSALLAFAIAQFLKVITTWYKEKRWDPKKIVGSGGMPSSHSSTVVALAVSIGLHEGIDSSSFAIAVVMAFIVMYDATGVRLHAGRQAEVLNQIVCEFPPEHPLSTSIPLRDSLGHTPLQVVAGAMLGCIVAFLMKATD 176
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aann4g01357 176 Pfam Divergent PAP2 family 37 168 IPR003832 -
Aann4g01357 176 CDD PAP2-like 38 171 - -
Aann4g01357 176 PANTHER ACID PHOSPHATASE-VANADIUM-DEPENDENT HALOPEROXIDASE-RELATED PROTEIN 22 174 IPR003832 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aann4g01357 K09775 uncharacterized protein
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Aann Aann-Chr3:125479469 Aann4g01357 Aann-Chr4:69287757 dispersed
Aann Aann-Chr4:69287757 Aann5g00742 Aann-Chr5:19532348 dispersed