Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Aann4g01386 | ATGATCCTCAATTTTACTGCTTTCATATATTTGAAATCTTGTTGCTTGTTTATCAAAAATCTTATTTCATTTTTATTTTATGTATGTGCAGCTCAAATAACTTCATACTTTTACCCTTATATGACTACCGAGTCAAAAGTTTCGCAGTATGATTACTTGCGACTCTCTGGCTTAGGTGTTATTGGGGCGCTTGTAAAGGAGACAGGTCCAGACACTCCAAATGTTGTTCGTTATCTTTTGCAAGTTGAAACTGTTCCTGTGTGCCTTCGCTGCATGGAAACGGGTGGCGACCTTACAAAATCGGTAGCTGCACTTATACTCGGTAGAATTTTTAGCCAAGAAGAAGGGAAGGCTTATATTGGGTCTTTTGTAGATAGATTTTATGTTGTCACAACGGCTTTGAAGAAAATCGTTGATGAGTTCACTGGAATACCTACACCCTCATTGTTGAAGAATATACTCATTTGCTACCTGCGACTAAGTGAGCTCTCGAGGTTATGCCGATGTTGTGATGCATTGAAGAGATGCTACCCTCTGCAGTTGAGGAATCCTGCGTACCTCAACTACATTTGTGATGGTACCACCAGAGGTTTGGCTGATCAGGTTCTGCAGAATATTAACTCAGGACCTCAAGTTCAATATGTAGGACTGGAAAATGCATTCGCGGGGATGCATATCTAG | 681 | 40.53 | MILNFTAFIYLKSCCLFIKNLISFLFYVCAAQITSYFYPYMTTESKVSQYDYLRLSGLGVIGALVKETGPDTPNVVRYLLQVETVPVCLRCMETGGDLTKSVAALILGRIFSQEEGKAYIGSFVDRFYVVTTALKKIVDEFTGIPTPSLLKNILICYLRLSELSRLCRCCDALKRCYPLQLRNPAYLNYICDGTTRGLADQVLQNINSGPQVQYVGLENAFAGMHI | 226 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Aann4g01386 | 226 | PANTHER | UNCHARACTERIZED | 29 | 208 | IPR007216 | GO:0000932(PANTHER)|GO:0006402(InterPro)|GO:0017148(PANTHER)|GO:0030014(InterPro)|GO:0030015(PANTHER) | |
| Aann4g01386 | 226 | Pfam | Cell differentiation family, Rcd1-like | 29 | 206 | IPR007216 | GO:0006402(InterPro)|GO:0030014(InterPro) | |
| Aann4g01386 | 226 | SUPERFAMILY | ARM repeat | 11 | 135 | IPR016024 | - | |
| Aann4g01386 | 226 | Gene3D | - | 13 | 209 | IPR011989 | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Aann4g01386 | K12606 | CCR4-NOT transcription complex subunit 9 |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Aann | Aann-Chr4:70888535 | Aann5g00743 | Aann-Chr5:19538145 | dispersed |
| Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
|---|---|---|---|---|---|---|---|
| Aann | Rcd1 | 4.8e-43 | CL0020 | TR | Rcd1-like |