AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

leaf

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aann4g01398 ATGATTTACCTATTTTACAGCGTGTTACTAATCGAAATGTCCACAATCTTGCTGCTTTTATTCAAAACGCCACTCCGTAAGCTATTGATAATCAGTTTAGATCGAGCCAAAAGGGGACGTGCACCGTTGGTTGTTAAATCAGTTGGGGCAACTGTTTTTGTTATTATGATGTATAACGTTTATAGTGTTACTGAGATTCAAAGCAGGGTTGAGGAGGCTGCTGTTAATCCTACTGATCAGATTCTTTTGGCTTATCATATGCTTGAAGCTTCTCTTATGGGATTCTCGCTTTTCCTGGCGCTGATGATAGATAGGCTACATCATTACATCAGAGAACTTCGCATACTTAGAAAGACCTTGGAAGCTGCAAAGAAACAAAACCGGACAGCTGAAGAAACCAAGAACTAA 408 39.71 MIYLFYSVLLIEMSTILLLLFKTPLRKLLIISLDRAKRGRAPLVVKSVGATVFVIMMYNVYSVTEIQSRVEEAAVNPTDQILLAYHMLEASLMGFSLFLALMIDRLHHYIRELRILRKTLEAAKKQNRTAEETKN 135
leaf

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aann4g01398 135 Coils Coil 106 133 - -
Aann4g01398 135 PANTHER BCR-ASSOCIATED PROTEIN, BAP 2 133 IPR008417 GO:0005783(InterPro)|GO:0005789(PANTHER)|GO:0006886(InterPro)|GO:0006888(PANTHER)|GO:0016020(InterPro)|GO:0070973(PANTHER)
leaf

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aann4g01398 K14009 B-cell receptor-associated protein 31
leaf

Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Aann Aann-Chr1:75828084 Aann4g01398 Aann-Chr4:71211532 dispersed
Aann Aann-Chr1:75867671 Aann4g01398 Aann-Chr4:71211532 dispersed
Aann Aann-Chr4:71211532 Aann6g02640 Aann-Chr6:76447661 dispersed
Aann Aann-Chr4:71203816 Aann4g01398 Aann-Chr4:71211532 tandem