Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Aann4g01426 | ATGAATCAAGTTAGCAGAAAAATGTGGGGTTTGAGCCTTAAGAAAACAATTATATGGCGTGTAGCTTTTCTACGAAGATGTGCGCGATCTTTTTGGCGCCAAATTTTAGCTTGTTGGATTGGGAAGTCTATTAGGTATAGGCAATTGTTAAAGTCCGGTTCGGGGTCTTTGATCCCGTCAACCTCTAGTCGTCGTTGTCCTAGTGCTAGGACAACGACGACTGTTGGTATGGAAACTCTAAGTCAGGAGTTTCCATCAAGGGAAATGACAGATAATAGCGGGGAAATAACTTCATTATGTGGAGGAGAGGAACATGATCATGGTAATGATTTGGTGGCTTTGAAGATTTGTTTGTTGGGAGATCATCATATTGGCAAAACAAGTTTCTTGGCAAAGTACATTGGGAAAGAGAAGAATCAAGAAGAATTAGAAGCTAAAAGAATAAACTCTATGGACAAAACATTGTGCATTAAAGGAGCCAGGATTTCATACAGCATATGGGAAGTTGGTGGTGATGCATTTTATCCAGATGGTGATCCAAGTACTTCGATTCCTACAGCTTGTAAAGACTCGGTTGCTATGCTATTCATGTTTGATCTAACAAGTCGCCGTACGCTTAATAGTGTTATCAATTGGCATCAACAAGCTAGGAATTATAATCAGACGGCGATTCCTGTGATGGTGGGTAGCAAGTTTGATGAATTTGTCCAACTTCCATTAGATTTACAATGGACGATTGCAAACGAGGCAAGAGCCTATGCGAAGGCCATAAACGCGACCTTGTTCTTCTCAAGTGCATCCTACAACATAAATGTAAATAAGATCTTCAAGTTTGTAACTGCAAAGCTTTTTGACTTGCCATGGACTTTGGAGCGCAATCTTAATATTGGCGAGCCTATTATTGACTTTTAG | 912 | 40.13 | MNQVSRKMWGLSLKKTIIWRVAFLRRCARSFWRQILACWIGKSIRYRQLLKSGSGSLIPSTSSRRCPSARTTTTVGMETLSQEFPSREMTDNSGEITSLCGGEEHDHGNDLVALKICLLGDHHIGKTSFLAKYIGKEKNQEELEAKRINSMDKTLCIKGARISYSIWEVGGDAFYPDGDPSTSIPTACKDSVAMLFMFDLTSRRTLNSVINWHQQARNYNQTAIPVMVGSKFDEFVQLPLDLQWTIANEARAYAKAINATLFFSSASYNINVNKIFKFVTAKLFDLPWTLERNLNIGEPIIDF | 303 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Aann4g01426 | 303 | ProSiteProfiles | small GTPase Rab1 family profile. | 104 | 303 | - | - | |
| Aann4g01426 | 303 | PANTHER | - | 112 | 302 | - | GO:0003924(PANTHER)|GO:0005525(PANTHER) | |
| Aann4g01426 | 303 | Gene3D | - | 103 | 292 | IPR027417 | - | |
| Aann4g01426 | 303 | PRINTS | Transforming protein P21 ras signature | 155 | 177 | - | - | |
| Aann4g01426 | 303 | PRINTS | Transforming protein P21 ras signature | 221 | 234 | - | - | |
| Aann4g01426 | 303 | PRINTS | Transforming protein P21 ras signature | 114 | 135 | - | - | |
| Aann4g01426 | 303 | PRINTS | Transforming protein P21 ras signature | 261 | 283 | - | - | |
| Aann4g01426 | 303 | Pfam | Ras family | 115 | 282 | IPR001806 | GO:0003924(InterPro)|GO:0005525(InterPro) | |
| Aann4g01426 | 303 | SMART | rab-sub-5 | 114 | 286 | - | - | |
| Aann4g01426 | 303 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 114 | 297 | IPR027417 | - | |
| Aann4g01426 | 303 | FunFam | Septum-promoting GTP-binding protein 1 | 104 | 293 | - | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Aann4g01426 | K07976 | Rab family, other |
| Select | Gene_1 | Gene_2 | Event_name |
|---|---|---|---|
| 519 | Aann1g03432 | Aann4g01426 |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Aann | Aann-Chr1:84715341 | Aann4g01426 | Aann-Chr4:71682219 | dispersed | |
| Aann | Aann-Chr4:71682219 | Aann3g03269 | Aann-Chr3:133639937 | dispersed |