AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

leaf

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aann4g01543 ATGGCTTCTTCTACAAACAGGTGCAACATCATCTTCCATGTTCTATTGCTTATACAGTTATGCAGTTCTCGGGCTATCTACGAAAAATCCGAAAACAATCACATGGAAGAAAATCATATAGAAATATTTGGAAAGAAGGAACATGGTGATTTGGATCCTGCTCTAAATGTGTTCTTCCATGTAAACGACTTATACTTGGGCAAAAAAATGTCAATATATTTTGCGGTTAGTGACCCATCAACAACTCCTCGGCTACTAGCAAGAGAACAAGTCGATTTGATACCATTTTCCTCATCAAAACTCCCATACCTTCTTGACTTTATCTCCTTAGCCGAGGGTTCGCCACAAGCCATAGCTATGGAGCAAACACTTAAACAATGTGAGCTTGAGCCAGTACCTGGTGAGATCAGGTTTTGCGCTAGCTCCTTAGAGTCCATGCTGGACTCAACACGTCGCATATTAGGTACAGACAAATTGAAGACTTTGACAACCCAAATCCATAATTTGACAAATCCCAGTTTCACCCTTTTGCAAGGCTATACCTTTTTGAAAGAGCCATTGGAGATTCATGTTCCTGATATGGTGGCTTGTCATACCATGGCTTATCCTTATACAGTTTACTATTGTCATGCTCAAAAGGGACATAATAGGGTTTTCCGGATTCCTTTAGGGGGTGAGAACGGAAATAGAGTCGATTCCATTGCTGTATGCCACATGGACACATCTATGTGGGATCATGATCACGTGGCGTTTCGTGTACTTGGAGGACACCCTGGCAGCTCACCGGTGTGCCATTTCCTCCCTGCTGATAACATCGTGTGGATACCATCACTGTAG 837 42.53 MASSTNRCNIIFHVLLLIQLCSSRAIYEKSENNHMEENHIEIFGKKEHGDLDPALNVFFHVNDLYLGKKMSIYFAVSDPSTTPRLLAREQVDLIPFSSSKLPYLLDFISLAEGSPQAIAMEQTLKQCELEPVPGEIRFCASSLESMLDSTRRILGTDKLKTLTTQIHNLTNPSFTLLQGYTFLKEPLEIHVPDMVACHTMAYPYTVYYCHAQKGHNRVFRIPLGGENGNRVDSIAVCHMDTSMWDHDHVAFRVLGGHPGSSPVCHFLPADNIVWIPSL 278
leaf

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aann4g01543 278 SMART BURP-2 56 277 IPR004873 -
Aann4g01543 278 ProSiteProfiles BURP domain profile. 58 277 IPR004873 -
Aann4g01543 278 PANTHER BURP DOMAIN PROTEIN USPL1-LIKE 39 277 IPR044816 -
Aann4g01543 278 Pfam BURP domain 57 275 IPR004873 -
leaf

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aann4g01543 - -
leaf

Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Aann Aann-Chr4:74608110 Aann9g01467 Aann-Chr9:56256839 dispersed
Aann Aann-Chr4:74532446 Aann4g01543 Aann-Chr4:74608110 proximal