AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aann4g01571 ATGGATGAAGGCAAGCGAATCAGCGTTGGTGTGGGTCCCACCTCTGTTTTGGAATACCTTGATCCTAACTACTGGAATGATAGGTTTACTTCTGAGGATCATTATGAGTGGCTTAAAGATTACTCCCATTTTCGTCATCTTATTCAGCAACATATCAAACCTGCATCTTCTGTATTGGAGCTCGGGTGTGGGAACTCACAACTGTGTGACGAGCTATATAAAGAAGGAATTACTGATCTAACCTCCATTGATCTATCTTCAGTTGCAGTTGCCAAAATGCAGAAACGACTGTTATCAAAAGGCCTTAAAGATATTAAAGTTATGGAAGGTGACATGCTGAATCTTTCCTTTACTGATGAGTCGTTTGATGTTGTTATAGAGAAAGGAACTATGGATGTTTTGTTCGTGGACAGTGGTGACCCGTGGAACCCGCGGCTAGAGGCTGTTAACAAGGCAATGGCAATGCTTCAAGGTGTTCATAGGGTCTTAAAACCTAATGGGATTTTCATCTCAATCGCTTTTGGTCAGCCACACTTTAGGCGTCCGTTATTTAATGCTCCTGAGTTCACGTGGTCAATCGAGTATTCTACATTTGGTGATGGATTCCACTACTTCTTTTATATTTTGAGGAAGGGATGCAGAACACTAGACTCCGATGCAGATATGAACAAGGTTGAGACACCATCTATATGCCTTTACCAAGATGAATTAGATAATGAAGATTACTTATTTCGCACCAACATTGATGAAATGGACGATGAAAGATAA 768 40.76 MDEGKRISVGVGPTSVLEYLDPNYWNDRFTSEDHYEWLKDYSHFRHLIQQHIKPASSVLELGCGNSQLCDELYKEGITDLTSIDLSSVAVAKMQKRLLSKGLKDIKVMEGDMLNLSFTDESFDVVIEKGTMDVLFVDSGDPWNPRLEAVNKAMAMLQGVHRVLKPNGIFISIAFGQPHFRRPLFNAPEFTWSIEYSTFGDGFHYFFYILRKGCRTLDSDADMNKVETPSICLYQDELDNEDYLFRTNIDEMDDER 255
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aann4g01571 255 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 23 207 IPR029063 -
Aann4g01571 255 Pfam Methyltransferase domain 53 173 IPR025714 -
Aann4g01571 255 CDD AdoMet-MTases 58 174 - -
Aann4g01571 255 FunFam EEF1A lysine methyltransferase 4 17 228 - -
Aann4g01571 255 Gene3D Vaccinia Virus protein VP39 17 226 IPR029063 -
Aann4g01571 255 PANTHER SAM-DEPENDENT METHYLTRANSFERASE SUPERFAMILY PROTEIN 13 212 IPR051419 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aann4g01571 K22857 EEF1A lysine methyltransferase 4 [EC:2.1.1.-]
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Aann Aann-Chr4:75237196 Aann5g03630 Aann-Chr5:115648941 dispersed