AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aann4g01613 ATGGCACCTCCAAAACCATCAAAACACACGATCTCCCAACAAGCATTCGACGAAATGGTTGAGGAAAACATAACCGATCTGGGCATGGACCCACCCGAAGCCTTAGCAGACGCAATCGAAACCCTCACTTTACAAAACGTAGATCTCTCCGGCATCATCACCTCCACACTTCCTGGACAGCCCAACCCTGTCATCCAGTCACTTGACAGAATCAAGGATGAGGTTTTGAAGAAAACCCATGATGATGATGGGTTGGTTTTGAGTGAAATGGTGGATGAGTTGGTTGGTTTGTGTGATGTGGAGGGGGAGGGGGAGGGAAATGTGGCGGTTTGTGGGAGGAATGGGGTGGTTGAGTTGATGTGTGAGATTTGTGGGAGAAGTGGGGGGAATGGGGTGAGGGTTCGGGTTTCGGCGTTGAATGCGTTGGCTTTGTTTGTTTGTGATATTCAAAGTACGGAAATATTTCGGAAGAGTGGAGGGCCGAAAATGGTGGTCGGTATTTTGAATGATGGAATTGAAAATGTGAATGTATTGAATAGTGGTTTTGCGGTTGTTGCTGTGGCTGCAACTGGTAATGAAGTTATTAAGGAGTCTTTTGTTGAGTTACATATACATGAGTTAATGATTAATGTGATGAGGAAGCATGGTAAAGGGAGCATCCCAAGTCTATATGATGCTATTCGAGTGCTTTTGGCAGCTGATGATAACCGAGTAGTGGCGTCACAAGTTTTTGGCTATGCGCGACAATTTGCGAAAATTGGAATTACGGAAGCTCTTGTGGAGTCACTTAAAGATGGGCTTAGCTCGCCAAGTTTGGTATCTGCAACTATTGCACTAAAGGCCATTGCAGTGAATGATGACATATGCAGATCCGTTGCTGAAAATGGTGGTATAGATTCATTGCTTGTTTGTATTGATGACGCTGGTGTACAGGGGAACAGCATTGTGGCTAAAGCTTGCTGCTCTTTATTATCGAAGTTGGCAGGAAGTGACTTTAATAAGAGCGCTATTGTTGAAAGGGGAGGGTTGAATAGGCTCATCACACTTTCTAGCAGACTTGCTGACGATCCTTCTGTCATCCAAGAGGTGATGACTATCATATGTACACTCTGCCTGCGATCGCCAGGAAATGCAACCTTAGCCATAGAAGCAGGAGCAGGAGATCTTGCAATCCAATCAATGCAGAAGTTCCCCGAGGCATATCAGCTGCAGAAAAACTCTTGTCTCATGATCCGTAATCTTGTTGCCAGGAATCCAGAGAACAGGACTCTTTTGTTGGGTAATGGTATTGAGAAGATCATACGTAAGGCTAAAGAAAACCATAAAAGCTGCAAAGACGCAGCTACCGCTGCTCTTAGGGACTTGGGGCTTGATAACTACAACTCGTAG 1389 45.21 MAPPKPSKHTISQQAFDEMVEENITDLGMDPPEALADAIETLTLQNVDLSGIITSTLPGQPNPVIQSLDRIKDEVLKKTHDDDGLVLSEMVDELVGLCDVEGEGEGNVAVCGRNGVVELMCEICGRSGGNGVRVRVSALNALALFVCDIQSTEIFRKSGGPKMVVGILNDGIENVNVLNSGFAVVAVAATGNEVIKESFVELHIHELMINVMRKHGKGSIPSLYDAIRVLLAADDNRVVASQVFGYARQFAKIGITEALVESLKDGLSSPSLVSATIALKAIAVNDDICRSVAENGGIDSLLVCIDDAGVQGNSIVAKACCSLLSKLAGSDFNKSAIVERGGLNRLITLSSRLADDPSVIQEVMTIICTLCLRSPGNATLAIEAGAGDLAIQSMQKFPEAYQLQKNSCLMIRNLVARNPENRTLLLGNGIEKIIRKAKENHKSCKDAATAALRDLGLDNYNS 462
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aann4g01613 462 Gene3D - 69 462 IPR011989 -
Aann4g01613 462 SUPERFAMILY ARM repeat 133 456 IPR016024 -
Aann4g01613 462 PANTHER UNCHARACTERIZED 6 54 - -
Aann4g01613 462 SMART arm-5 285 329 IPR000225 GO:0005515(InterPro)
Aann4g01613 462 SMART arm-5 374 416 IPR000225 GO:0005515(InterPro)
Aann4g01613 462 SMART arm-5 330 372 IPR000225 GO:0005515(InterPro)
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aann4g01613 K24166 armadillo repeat-containing protein 6
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Aann Aann-Chr4:76646144 Aann5g04288 Aann-Chr5:132287726 dispersed