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AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aann4g01619 ATGGAGATACAAACTATGATACCCTCACCGGATGCAAGCACCACCACCACCCCTTATGTGACCGCACCGTCCACCCCTCACCGCTTCCCGACTTTCTTCTATAGCGCGCCCACGAGCCCTACACACGGCCTCGTTAACTTTCAATACCTCGATGATGATAACAATAATGAAAATGATTTTGCATTCAACTTCGTCAGCGGCCAGATGGAAACACCTTCTATCTCTGCCGCTGATGAACTTTTCCATGGAGGAAAAATAAAGCCCTTGAAACCCGTCCCTAGTGAAAACCAAAATTCATTGTCTCCTAAGTCTAAGAAAAAGGATTTCGATTCTTTTATTGAGACATCTCATCAGAAATCTGACGATACATATAACGCTACTCAAAACACGCCGAAAAGAGGAAGAAAAGTCACTAAAGCAAGAACCATGCACAAAGTATCACGATCATCATCACCTTTTAGGATATCAGATATCTTATCTGACGAGGAAACAACTCAAAAGAACTGGTACAACAAATGGAACCTAAAGAACTTGCTATTGTTTCGTAGCACATCCGAAGGGAGTGGGGTACGAAGGAAAGATCCGGAGAATAAATATTCGAGAATAACGAAAAGAGATGAAGATGTCAAGAATGCAAGTTTTAGAAGTATCGAAAGTTATAACTCGGTTGGAGAGTCTAGCAGGAGAGTAATGAGGAAAGTTTCGGCCCATGAAATGCATTATACCGCGAATAGGGCCGTTGCTGAGGAGATGAAGAAGAAGACATATTTGCCGTATAAATCAGGGTTGTTAGGCTGTTTGGGATTTCATAATCATGGGATTTCAAGAGGGATTACTTCTGTTATGAAACAACAAAGAGGATATTGA 867 41.75 MEIQTMIPSPDASTTTTPYVTAPSTPHRFPTFFYSAPTSPTHGLVNFQYLDDDNNNENDFAFNFVSGQMETPSISAADELFHGGKIKPLKPVPSENQNSLSPKSKKKDFDSFIETSHQKSDDTYNATQNTPKRGRKVTKARTMHKVSRSSSPFRISDILSDEETTQKNWYNKWNLKNLLLFRSTSEGSGVRRKDPENKYSRITKRDEDVKNASFRSIESYNSVGESSRRVMRKVSAHEMHYTANRAVAEEMKKKTYLPYKSGLLGCLGFHNHGISRGITSVMKQQRGY 288
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aann4g01619 288 MobiDBLite consensus disorder prediction 85 148 - -
Aann4g01619 288 PANTHER OS07G0619500 PROTEIN 20 271 - -
Aann4g01619 288 MobiDBLite consensus disorder prediction 118 133 - -
Aann4g01619 288 MobiDBLite consensus disorder prediction 101 117 - -
Aann4g01619 288 Pfam Protein of unknown function (DUF1645) 77 258 IPR012442 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aann4g01619 - -
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Event-related genes

Select Gene_1 Gene_2 Event_name
490 Aann1g03322 Aann4g01619
1669 Aann2g04284 Aann4g01619
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Aann Aann-Chr4:76776604 Aann9g01129 Aann-Chr9:35270788 dispersed
Aann Aann-Chr8:9182963 Aann4g01619 Aann-Chr4:76776604 transposed
Aann Aann-Chr1:83241363 Aann4g01619 Aann-Chr4:76776604 wgd
Aann Aann-Chr2:120797495 Aann4g01619 Aann-Chr4:76776604 wgd