AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

leaf

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aann4g01700 ATGCTACCTCGTCATGACAGGATTATATGTTTTATTGCAATGGCTGACAAAAAACACACACAACACAAACACATTTTATCAAAACAAAGATCATGGTCACCCGACATAAACCGCGACTTAGAGTGGCAGAAACTTAAGACGAAACAACGATATCGTAACCTTTGTCGTAGCAAGAGTACTGTTGATGATCATGATCATGGTGGTGCAGACGTCACTGATGATGATGTTAAGGAGTTGAAAGCTTGTTTTGATTTAGGGTTTGGTTTTGATAAGCTGGATGATATGGACCCGAAACTTACGCATGCTTTTCCTGCACTCGAGCTCTATGCTGCGGTTAAACGAGGGTATAATGGTGGTGTAATGCTGTCAAGGTCTTCGTCGTCGATTAGCACTGATTCTTGTTCGAGTTCTTCAAGCATTGCTACGTCTATTGTTGATCCAAGTGATGATCCACAAAAGGTAAAGGCGAAATTGAAACAATGGGCTCAACTCGTTCGTTATTCGATTCAGGAAACTTCTTCCAACGACAAAAATGTTGCACAATAG 546 41.03 MLPRHDRIICFIAMADKKHTQHKHILSKQRSWSPDINRDLEWQKLKTKQRYRNLCRSKSTVDDHDHGGADVTDDDVKELKACFDLGFGFDKLDDMDPKLTHAFPALELYAAVKRGYNGGVMLSRSSSSISTDSCSSSSSIATSIVDPSDDPQKVKAKLKQWAQLVRYSIQETSSNDKNVAQ 181
leaf

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aann4g01700 181 MobiDBLite consensus disorder prediction 126 152 - -
Aann4g01700 181 Pfam Protein of unknown function (DUF1685) 71 128 IPR012881 -
Aann4g01700 181 PANTHER OSJNBA0071G03.3 PROTEIN 21 170 - -
Aann4g01700 181 MobiDBLite consensus disorder prediction 126 146 - -
leaf

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aann4g01700 - -
leaf

Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Aann Aann-Chr1:126700020 Aann4g01700 Aann-Chr4:78048240 dispersed
Aann Aann-Chr3:155352575 Aann4g01700 Aann-Chr4:78048240 dispersed
Aann Aann-Chr4:78048240 Aann4g01867 Aann-Chr4:82951637 dispersed
Aann Aann-Chr4:78048240 Aann3g01143 Aann-Chr3:86154932 transposed