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AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aann4g01730 ATGGCTTATCAGACCATTCAAGGCGGTCTCCTTGAAGTAACCGTTGTTAGTTGCAATAAACTAAGGGATACCGAATGGTTCTCAAGGCAAGATCCTTACGTAAGCATCGAATATGGTAGCTATAGATCATCAACTCGTACTTGTACAGATGGAGGCAAGAGCCCTACATTTCAAGAGAAGTTTGTGTTTAGCTTGATTGAAGGATTAAGAGACATAAATGTTTCGGTTTGGAATAGCAATACACTTACACACGATGACTACATTGGTGGCGGAAGAATTCCGTTGACAAAGGCTTTTTCTCAAGGATTTGATGATAGTAGTTGGCCATTACAGAGTAAAACCGGAAGGCATGCCGGAGAGGTCCGACTGATCATGCATTATTCCAATGCCAATAATCCTGGTGCTCAAAAGCCATCAAAAGGTCTTGCTCCACAAGGTGCACCTTCCGGATCCATGTACCCAGCAGCGCCCCCGTCCATGTACGGCGCACCACCTCCGGGGTCTATGTACCCTGCACCAGCACCAGGGTCCATGTACCCCTCGTACCCACCAAATACAAGTGCGTATCCACCCACTCCATACCCAAATCAGATGCCTAACTATCCTCCTACACCATATCCTTATGGATCACAGTATCCCCCTGGTTCTCCATTCCCGGGAACGTATCCTCCACCACCTTATTGA 684 47.08 MAYQTIQGGLLEVTVVSCNKLRDTEWFSRQDPYVSIEYGSYRSSTRTCTDGGKSPTFQEKFVFSLIEGLRDINVSVWNSNTLTHDDYIGGGRIPLTKAFSQGFDDSSWPLQSKTGRHAGEVRLIMHYSNANNPGAQKPSKGLAPQGAPSGSMYPAAPPSMYGAPPPGSMYPAPAPGSMYPSYPPNTSAYPPTPYPNQMPNYPPTPYPYGSQYPPGSPFPGTYPPPPY 227
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aann4g01730 227 MobiDBLite consensus disorder prediction 130 151 - -
Aann4g01730 227 PANTHER CONSERVED SERINE PROLINE-RICH PROTEIN (AFU-ORTHOLOGUE AFUA-2G01790) 1 226 IPR052981 -
Aann4g01730 227 MobiDBLite consensus disorder prediction 172 227 - -
Aann4g01730 227 ProSiteProfiles C2 domain profile. 1 109 IPR000008 -
Aann4g01730 227 Gene3D C2 domain 8 129 IPR035892 -
Aann4g01730 227 SMART C2-3c 10 107 IPR000008 -
Aann4g01730 227 Pfam C2 domain 9 100 IPR000008 -
Aann4g01730 227 CDD C2 11 108 - -
Aann4g01730 227 SUPERFAMILY C2 domain (Calcium-lipid-binding domain, CaLB) 7 129 IPR035892 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aann4g01730 - -
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Event-related genes

Select Gene_1 Gene_2 Event_name
478 Aann1g03289 Aann4g01730
480 Aann1g03292 Aann4g01730
1683 Aann2g04343 Aann4g01730
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Aann Aann-Chr1:82733097 Aann4g01730 Aann-Chr4:78707077 dispersed
Aann Aann-Chr2:123025283 Aann4g01730 Aann-Chr4:78707077 wgd