AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aann5g04691 ATGGAGTTTTGGGTGGTTGCAGCAGCTACGGGTGCTGGTTATGTAGCCAAACACTGGCAGAACTTATCAGGGGACAAAGATGGCTCATCAAAGCTGTCGCCTATGTTGTCACCATGGGTGCAACCAGATGCATGTCCACTGTTACGTAAGTTGCCTAACTCAGTTTCCGGTTCAGCTCCAATCTTTATCGAGAAACAAGTATTTCAAGATAACACAAATGATAATAATGGAAATCAACATCACTTTGACACTTCTACCCCGCCTTCTAGCCCTCGTTTACACGAATTCAGAACCAAGAACGCTAATAGAAAATCTTCCTCGAGCCTAAGGCCCTTAATGGTAACTGGTAATAGCAGAGATTGTCAAAGAAGGCAAGTAACACAAGTTAATGATGTTAACGATCATAAGATATTTTTCATGGAAGAAAATGGAGCATCTGTAGAAGCAGATATGTTTGACCCAATTGGATCAGTGAAGCTGCCAAGGAGACCAGAAAAAACGCATTCACAAGGCAAGGACACGGTGTCATTGTTCCTCGGGATTACAATTGGCATATTATCAAGTATTGTGACTAATCAACATGAAATTGAACACCTAAATGAGCTGCTAGAACAAGCTGAGAATATTGTTCAAGATTTACACAATAGACTTGAAGTAAAAGATGGGTTTACCACAAAGGAGACTGGCACAAAAACAGATGGAACTAGTCAAACCGATAGCTCAAAAGTTGAGAACTGTGAATTAACAAGTGATATCGAGGCTGAGCTTGAGGCCGAGCTTGAAAGATTGGAAGAAAATATGAAGGGTGCCACTCTGCAAAGATTGTCTGATGTGGTTGAGATTGATTCAGACTTTGAAGCAGATATAGCTAGAGGCGACTTGAACCTAGATGCACTAAACTGGCAACTTGATAGCCAATCTGAATCAGACAATGATGACAAATGGGTCAAAAGTGAAAGCACCGGGAAGCACGTGTTCACTCCAAATTACACAGTTTCACCTCTTGATTTACGGTTACGTCTTCACGAAGTAGTCGAGTCAGAACTGAGAGCACGTATTGATGCGCTGGAGGCAGTTCTTGAGAACCGAAAAAGTCAAAGTAAGCCACATTCTCCAGAACCACAAGAAGAAAAATCTTTCTGGGATTTTGACCACACGAGAATTGAGTCTTCTTCATCAACCCCTTAA 1188 41.67 MEFWVVAAATGAGYVAKHWQNLSGDKDGSSKLSPMLSPWVQPDACPLLRKLPNSVSGSAPIFIEKQVFQDNTNDNNGNQHHFDTSTPPSSPRLHEFRTKNANRKSSSSLRPLMVTGNSRDCQRRQVTQVNDVNDHKIFFMEENGASVEADMFDPIGSVKLPRRPEKTHSQGKDTVSLFLGITIGILSSIVTNQHEIEHLNELLEQAENIVQDLHNRLEVKDGFTTKETGTKTDGTSQTDSSKVENCELTSDIEAELEAELERLEENMKGATLQRLSDVVEIDSDFEADIARGDLNLDALNWQLDSQSESDNDDKWVKSESTGKHVFTPNYTVSPLDLRLRLHEVVESELRARIDALEAVLENRKSQSKPHSPEPQEEKSFWDFDHTRIESSSSTP 395
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aann5g04691 395 Coils Coil 346 366 - -
Aann5g04691 395 MobiDBLite consensus disorder prediction 70 95 - -
Aann5g04691 395 Coils Coil 189 216 - -
Aann5g04691 395 PANTHER EMB|CAB62613.1 1 368 IPR040348 GO:0008356(InterPro)
Aann5g04691 395 MobiDBLite consensus disorder prediction 361 395 - -
Aann5g04691 395 MobiDBLite consensus disorder prediction 361 385 - -
Aann5g04691 395 MobiDBLite consensus disorder prediction 70 114 - -
Aann5g04691 395 Coils Coil 246 273 - -
Aann5g04691 395 MobiDBLite consensus disorder prediction 224 243 - -
Aann5g04691 395 MobiDBLite consensus disorder prediction 228 243 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aann5g04691 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Aann Aann-Chr5:146957146 Aann9g01367 Aann-Chr9:50109705 dispersed
Aann Aann-Chr5:146957146 Aann1g04789 Aann-Chr1:102499591 transposed