Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Aann7g00674 | ATGCCGGTGTCCCGACCAGAATCATCTGATTCGAGAATCATTGCTCATGTCGACATGGACTGCTTCTATGTTCAAGTGGAGCAACGGAAAAACCCTGATCTAAGAGGAAAACCAACTGCTGTTGTGCAATACAATTCTTGGAAAGGTGGAGGTCTAATTGCTGTCGGTTATGAGGCTCGAAAAGATGGGGTCAAACGTTCAATGAGAGGTGATGAGGCTAAAGAAGTTTGTCCAGAAATACATCTGGTACAAGTGCCTGTGGCACGTGGTAAAGCTGACTTGACCATATATCGGGATGCAGGTTCAGAGGTTGTTTCTATTCTTGCAAGAAAGGGACGATGTGAGCGTGCATCAATTGATGAAGTTTACCTTGACCTCACTGATGCTGCTGAAACAATGCTGAAAGAAACGCCACTTGAAAGCTTGGAAAGTATAGATGAGGAAGTTTTGAAATCACATGTTTTGGGACTTAGTTCGGATGGAAAGGATGACAGAGAAAGTGTGAGGGAATGGCTGCAGCGCAAAGATGCTGATCACCGTGATAAGCTGTTAGCATGTGGAGCCATTATTGTTGCTGAACTCAGGTTGCAAGTTTTGCGAGAGACCGAGTTTACATGTTCTGCAGGCGTTGCTCATAACAAAATGCTGGCAAAATTAGCAAGTGGTATGAATAAACCTGCACAACAAACTATTGTCACTTCCGCATCAGTAAAAGAGCTTCTTGAAACCTTGCCTGTAAAGAAAATGAAACAACTTGGTGGGAAGCTTGGGAGTTCATTGCAAACGGACCTAGGTGTGAATACCGTTGGAGATCTATTGCAATTTTCTGAAGAAAAACTACAAGATTTCTATGGTGTCAACACTGGTACTTGGCTATGGAATACTGCTCGAGGGATCAATGGGGACGAAGTTCAGGGCCGTTTGCTGCCTAAAAGCCATGGGTCTGGGAAAACATTTCCCGGAGTTAGGGCCCTAAAAACTGTTGTTGCTGTTGAAAAATGGCTGAAAGAACTCTGTGAAGAGTTAAATGAACGACTTCAGTCAGACCTGGTGAAGAATAAACGAATCGCGCATACACTTACTCTGTATGCTAATGCATACAAGTCAACAGATACAGAATCACACAAAAAGTTTCCTTCAAAGTCATGTCCTTTGAGATATGGAGCAGGAAAAATTATGGAAGATGCCGTAAATCTTTTCCAAGCTGCTTTACGTGAATACCTCGGGCCATATATCGGAAACCAGTGTGGTGGATGGGGAGTTACTAATCTATCTGTTTCAGCCAGTAAAATTGTTGCCATACCATCTGGAACGTCGTCGATCACAAAGTACTTTCATAGTCGAGATCAGTTAAACGATTCATCAGAACCGTTGGGTGAAAAGTTTGTACTTGAAGATGATCATGTGTCACCATCAAGTAGAACTGAAAGTCATCCGGCTTCTCATCAAATTGAATGTGGTGAGGAAGAGATTCCAATCACACATGATATCTCCAGTTCTGATCAATGTGAGACTGCATGTAAAGATGAGGCTAGTGGTGATATTGCCGGAGAAGCTTTCAAGTTATCATCACCAGGAACTGAAAGCTGTTCGACTTCAAAGCAGAAAGAGCAACAATCAAGGTTACATGGGAAAGAAACTAAAATGATGCACCCCAATGATGGAATAAAATCATATAATCAAAAGAGAAAGGCAACAAAAGAAAAGGGAACGTCTTCCATATTGCGATTTCTCCAAAGCAACTCTACCTCATCGTCAAAGCAAGACAATCTCACTCCTCTTCAAGAAACAAACTCTTTGTCCTTGGGCACACAAGAACCGTTGAATATACAGAGTCAAAGCTTGAGTCAAAATGTACAGACAACAAATGCTTGGAGTTACAAGGTAGATGAAATCGACCAATCAGTTATCGAAGAATTACCACTGGAAATACAGCAAGAATTTCGTACTTGGCTTCAGCCTCAGAAGAGGCCAAACATTATGAAACGAGGTTCTAGCATTGCTGATTACTTCTCTCCTACGAAAAACTAG | 2031 | 42.05 | MPVSRPESSDSRIIAHVDMDCFYVQVEQRKNPDLRGKPTAVVQYNSWKGGGLIAVGYEARKDGVKRSMRGDEAKEVCPEIHLVQVPVARGKADLTIYRDAGSEVVSILARKGRCERASIDEVYLDLTDAAETMLKETPLESLESIDEEVLKSHVLGLSSDGKDDRESVREWLQRKDADHRDKLLACGAIIVAELRLQVLRETEFTCSAGVAHNKMLAKLASGMNKPAQQTIVTSASVKELLETLPVKKMKQLGGKLGSSLQTDLGVNTVGDLLQFSEEKLQDFYGVNTGTWLWNTARGINGDEVQGRLLPKSHGSGKTFPGVRALKTVVAVEKWLKELCEELNERLQSDLVKNKRIAHTLTLYANAYKSTDTESHKKFPSKSCPLRYGAGKIMEDAVNLFQAALREYLGPYIGNQCGGWGVTNLSVSASKIVAIPSGTSSITKYFHSRDQLNDSSEPLGEKFVLEDDHVSPSSRTESHPASHQIECGEEEIPITHDISSSDQCETACKDEASGDIAGEAFKLSSPGTESCSTSKQKEQQSRLHGKETKMMHPNDGIKSYNQKRKATKEKGTSSILRFLQSNSTSSSKQDNLTPLQETNSLSLGTQEPLNIQSQSLSQNVQTTNAWSYKVDEIDQSVIEELPLEIQQEFRTWLQPQKRPNIMKRGSSIADYFSPTKN | 676 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Aann7g00674 | 676 | Gene3D | - | 304 | 433 | IPR036775 | GO:0003684(InterPro)|GO:0006281(InterPro) | |
| Aann7g00674 | 676 | Gene3D | - | 89 | 232 | IPR043128 | - | |
| Aann7g00674 | 676 | FunFam | DNA polymerase eta | 21 | 88 | - | - | |
| Aann7g00674 | 676 | Pfam | DNApol eta-Rev1, HhH motif | 244 | 299 | - | - | |
| Aann7g00674 | 676 | Pfam | impB-mucB-samB family C-terminal domain | 310 | 437 | IPR017961 | GO:0003684(InterPro)|GO:0006281(InterPro) | |
| Aann7g00674 | 676 | PIRSF | DNA-pol-eta | 6 | 675 | - | - | |
| Aann7g00674 | 676 | FunFam | DNA polymerase eta | 304 | 432 | - | - | |
| Aann7g00674 | 676 | FunFam | DNA polymerase eta | 89 | 232 | - | - | |
| Aann7g00674 | 676 | MobiDBLite | consensus disorder prediction | 538 | 570 | - | - | |
| Aann7g00674 | 676 | ProSiteProfiles | UmuC domain profile. | 14 | 253 | IPR001126 | GO:0006281(InterPro) | |
| Aann7g00674 | 676 | FunFam | Polymerase (DNA directed), eta | 246 | 302 | - | - | |
| Aann7g00674 | 676 | SUPERFAMILY | DNA-RNA polymerases | 8 | 304 | IPR043502 | - | |
| Aann7g00674 | 676 | Gene3D | - | 246 | 302 | - | - | |
| Aann7g00674 | 676 | PANTHER | DNA POLYMERASE ETA | 1 | 662 | IPR052230 | GO:0003887(PANTHER)|GO:0005634(PANTHER)|GO:0005657(PANTHER)|GO:0009314(PANTHER)|GO:0035861(PANTHER)|GO:0042276(PANTHER) | |
| Aann7g00674 | 676 | MobiDBLite | consensus disorder prediction | 520 | 571 | - | - | |
| Aann7g00674 | 676 | Pfam | impB-mucB-samB family | 17 | 221 | IPR001126 | GO:0006281(InterPro) | |
| Aann7g00674 | 676 | SUPERFAMILY | Lesion bypass DNA polymerase (Y-family), little finger domain | 309 | 433 | IPR036775 | GO:0003684(InterPro)|GO:0006281(InterPro) | |
| Aann7g00674 | 676 | Gene3D | - | 21 | 88 | - | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Aann7g00674 | K03509 | DNA polymerase eta [EC:2.7.7.7] |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Aann | Aann-Chr4:80209223 | Aann7g00674 | Aann-Chr7:44216127 | dispersed |