AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aary13g03194 ATGAGGATAAAAAACAAAAACAAAACTTCTATACTCTTGCCTGAGAAAGTTTCTACCAATCAAATTTCTCAACAGCCAAATTCTTATGAAGGTGAAAGTCTTTTATATCTTCTCAACTCAATTCAAATGGAAATTAAGTTAGCGAGACTAAAAGATGAATCTTTACCTCATAAAATTTGGCTAAAGCAACAATTTTCAATTGGAGTAAATGATGTGACCCGTGTGCTTGAACGGATGCCACCGGTTATGGGATCTGTAATCGCGACTCCACAAAATGCTACTTTCTGCAGTCGTAATTCTGAATCCCCTTCACTCCAACTTCAGGCAATACTTATAGCAACTGACTGTAATCCTCGAGGGCTAACAAAGCACCTACCAGTCCTTGCCTCTTCTAGGGAGGTGCCCGTTATCTTTGTGAAAGATAAAAAAGGGGGATCTTTCAAATTAGGTGAAATTGTGAATATGAAGACGGCTATGGCAATTGGAGTTAAGGCTAGAGGAAATTCAATCAACAAACTCATAGGCGAGATTCTTGGAGATAACAAGGTAAATAATGGCGTTGTGGTCGTCGAGTGA 576 38.89 MRIKNKNKTSILLPEKVSTNQISQQPNSYEGESLLYLLNSIQMEIKLARLKDESLPHKIWLKQQFSIGVNDVTRVLERMPPVMGSVIATPQNATFCSRNSESPSLQLQAILIATDCNPRGLTKHLPVLASSREVPVIFVKDKKGGSFKLGEIVNMKTAMAIGVKARGNSINKLIGEILGDNKVNNGVVVVE 191
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aary13g03194 191 PANTHER OS07G0636400 PROTEIN 1 184 - -
Aary13g03194 191 Pfam Ribosomal protein L7Ae-L30e-S12e-Gadd45 family 107 169 IPR004038 -
Aary13g03194 191 Gene3D - 39 178 IPR029064 -
Aary13g03194 191 SUPERFAMILY L30e-like 56 177 IPR029064 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aary13g03194 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
95563 Aary Aary13g03194 Aary-Chr13:189019264 Aary13g03197 Aary-Chr13:189177201