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AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aary13g03209 ATGACGCACAAGCAGGAAATTTTGTTTGGTTCTGGAGCTTGTGTAGCAATTACAGTACTATTATCATTAAAGTTGGTACGTGATCATCTTACTCACTGGAAGAAACCAAAAGAACAAAAAGCGATTCTAGTGATTATATTGATGGCACCCATCTACGCTCTTGACTCGTATGTTGGATTACTCGATATACGTGGTAGTGAGACCTTTTTTCTGTTCTTAGACTCCATCAAAGAATGCTATGAGGGTTTGGTGATGGCTAAGTTCTTGGCTTTGTTGTACACTTATTTGAATATATCTATAACCAAGAACATTGTCCCCGATGAGATTAAAGGAAGAGAAATTCATCATTCGTTCCCCATGACTCTCTTCCAACCTCACTCAGTTCGTTTGAACCATCAAAACCTGAAGCTCCTCAAGTATTGGACATGGCAGTTTGTAGTAATTCGCCCAGTATGCTCCGTCTTGATGATAGTTCTACAACTCCTTGAGATATATCCTGATTGGCTTAGCTGGACATTCACTATGATCTTGAATGTATCTGTTTCATTGGCATTATATGCTCTCGTGGTTTTTTACCATGTATTTGCTAAAGAATTGGCACCACATAAGCCTCTTGCAAAGTTCTTATGTGTCAAAGGGATTGTCTTCTTCTGTTTTTGGCAGGGAATTGTACTCAGTGGGTTGGTAGCAGTGGGCATAATTACAGCGGATCATTTTTGGCTGGATGTGTCACATATCCAAGAAGCATTGCAAAACGCATTGGTGATTGTGGAGATGGTGTTTTTCGCAGGCTTTCAGATGTATGCATACACTGCTGCACCATACAAGATTGATGAGGTGAAAGAAAAGAAGAAAGAATGA 861 39.84 MTHKQEILFGSGACVAITVLLSLKLVRDHLTHWKKPKEQKAILVIILMAPIYALDSYVGLLDIRGSETFFLFLDSIKECYEGLVMAKFLALLYTYLNISITKNIVPDEIKGREIHHSFPMTLFQPHSVRLNHQNLKLLKYWTWQFVVIRPVCSVLMIVLQLLEIYPDWLSWTFTMILNVSVSLALYALVVFYHVFAKELAPHKPLAKFLCVKGIVFFCFWQGIVLSGLVAVGIITADHFWLDVSHIQEALQNALVIVEMVFFAGFQMYAYTAAPYKIDEVKEKKKE 286
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aary13g03209 286 PANTHER ORGANIC SOLUTE TRANSPORTER-RELATED 8 278 IPR005178 GO:0005215(PANTHER)|GO:0006810(PANTHER)|GO:0016021(PANTHER)
Aary13g03209 286 Pfam Organic solute transporter Ostalpha 8 275 IPR005178 -
Aary13g03209 286 SMART Solute-trans-a-2 7 275 IPR005178 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aary13g03209 K14360 organic solute transporter subunit alpha
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Event-related genes

Select Gene_1 Gene_2 Event_name
168143 Aary5g02743 Aary13g03209
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Aary Aary-Chr13:190128655 Aary6g01682 Aary-Chr6:100029065 dispersed
Aary Aary-Chr13:190128655 Aary5g02743 Aary-Chr5:161315608 wgd