Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Aary13g03213 | ATGGAGTATGAAAAAGAATTAGAAGTGGGTGTAAGAGTGGTTCAGTTAGCATGTTGTTTATGTCAAAAGATACAAAAGGGGTCATTTGGTCCTAACCCTGATCTTGTTGTTTCTAAACTTGATGATTCTCCTGTTACTGTTGCTGATTGGAGTGTACAAGCATTGATTAGTTGGATACTATCAGAATCATTCGGTAGAGAAAATGTCTCGATTGTCGCGGAAGAAGACACACAAACCCTTTCCGATGTCAAATCCACATCTTTATTAGCATCTGTGGTGACAACTGTTAACGAAAGTTTAGCGATGGCACCCCGGTTCGGTCTCAATGGACCAACCGCACCCCTCGAGGCTTCAGAAGTTCTTGATGCCATTAGCCGATGTAATTCAAGTGGTGGTCCAGTGGGAAGGCATTGGGTCCTTGACCCCGTTGATGGAACTTTAGGGTTTGTTCGTGGAGGTCAGTATGCGGTGGCTCTGGCTTTGATCGAAAATGGGCGGGTTGTGGTTGGGGTTCTTGGATGTCCTAATTATTCAAGTAAAAGGAAATTGGTTAATAATTCAAGTGTACCGAAATCAGATTTGTGGCAAGAAGGGTGTGTTATGTATACAAAGAGAGGTAGTGGTCAAGCTTGGATGCAGCCGTTGGTTTGTGGTGATGGGACACTTGAGTGGCCTAATTCGGCTAGTGTTATACAGGTTTCCTCCATTGATAATCCTGTTATGGCTACGTTTTGTGAACCGGTGGAAAAAGCTAACTCTAACCATTCGTATAGTGCTGGAATCGCTTACAGTTTAGGCCTTAGAAAGCAACCGTTGCGTGTTTATAGCATGGTAAAATATGCAGCCATAGCAAGGGGAGATGCAGAGATATACATGAAGTTTGCAAAAGCTGGATACAAGGAAAAGATATGGGATCATGCTGCTGGTGTGGTGATTGTTGAAGAAGCTGGTGGGGTTGTGACAGATGCGGGTGGCCGGCCTTTAGATTTTTCAAAAGGGGTGTATCTTGAAGGTCTTGATCGGGGGATCGTGGCATGTTCCGGGGTGAATTTGCATGAGAAAATTATAGGTGCTGTTTATGCAAGTTGGGATTCTTCTCACTTGTGA | 1107 | 44.08 | MEYEKELEVGVRVVQLACCLCQKIQKGSFGPNPDLVVSKLDDSPVTVADWSVQALISWILSESFGRENVSIVAEEDTQTLSDVKSTSLLASVVTTVNESLAMAPRFGLNGPTAPLEASEVLDAISRCNSSGGPVGRHWVLDPVDGTLGFVRGGQYAVALALIENGRVVVGVLGCPNYSSKRKLVNNSSVPKSDLWQEGCVMYTKRGSGQAWMQPLVCGDGTLEWPNSASVIQVSSIDNPVMATFCEPVEKANSNHSYSAGIAYSLGLRKQPLRVYSMVKYAAIARGDAEIYMKFAKAGYKEKIWDHAAGVVIVEEAGGVVTDAGGRPLDFSKGVYLEGLDRGIVACSGVNLHEKIIGAVYASWDSSHL | 368 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Aary13g03213 | 368 | Gene3D | - | 1 | 219 | - | - | |
| Aary13g03213 | 368 | ProSitePatterns | Inositol monophosphatase family signature 1. | 138 | 151 | IPR020583 | - | |
| Aary13g03213 | 368 | CDD | PAP-phosphatase | 6 | 361 | - | - | |
| Aary13g03213 | 368 | PANTHER | PHOSPHATASE | 2 | 364 | IPR051090 | GO:0000103(PANTHER)|GO:0008441(PANTHER)|GO:0042578(PANTHER) | |
| Aary13g03213 | 368 | SUPERFAMILY | Carbohydrate phosphatase | 3 | 361 | - | - | |
| Aary13g03213 | 368 | ProSitePatterns | Inositol monophosphatase family signature 2. | 304 | 318 | IPR020550 | GO:0046854(InterPro) | |
| Aary13g03213 | 368 | Gene3D | - | 232 | 362 | - | - | |
| Aary13g03213 | 368 | FunFam | PAP-specific phosphatase HAL2-like | 232 | 365 | - | - | |
| Aary13g03213 | 368 | Pfam | Inositol monophosphatase family | 42 | 360 | IPR000760 | - | |
| Aary13g03213 | 368 | NCBIfam | 3'(2'),5'-bisphosphate nucleotidase | 3 | 366 | IPR006239 | GO:0006790(InterPro)|GO:0008441(InterPro) |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Aary13g03213 | K01082 | 3'(2'), 5'-bisphosphate nucleotidase [EC:3.1.3.7] |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Aary | Aary-Chr13:190192324 | Aary4g01603 | Aary-Chr4:102216125 | dispersed | |
| Aary | Aary-Chr5:161072420 | Aary13g03213 | Aary-Chr13:190192324 | transposed | |
| Aary | Aary-Chr12:94285918 | Aary13g03213 | Aary-Chr13:190192324 | wgd |