AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aary13g03235 ATGACTGGACTGTCATTGGATATAAGAACACAGAGTTATGCATCACCTCAGCAACCGCAGAATGGTTCATTGCAGACTCAAAATGGGTTCATTGTACGCAAGTCTTCGAGGATGTCGCTGTCTGGATCGAGAGAGAAGGATAGATTTCTTACATTTTTGTGCAGATATTTAAGTAGAAAGAAGGTTGTAATGATGATTTTAATGTCATTTGCTCTCATGGCTTTCTTGTCGGGGTTCTTTACCTCCAATAGAGAAGCTGCATCAGAGCGCACGATCTTCAATCCTTTTAACGAGACATTTAATGCCTCTTTCCAGTTTTCTAGATTTGGTAATCAGAAATACAATAATTCTTCCACGGAGACAACGCTGTCTGTATGTGAAGTGAACCCCCCTACTCGTCGTTATTCGGATGCATCACTTTCTACAGGATCCGTTATTTCTCATAGCAATTTGTGTAAAAATTTTGCATTTCCTCCTCCTCCTCCTGGTGATAGGAGACGACCTGGACCTCGACCTTGTCCTGTATGTTACCTTCCAGTGGAGGAGGCTATGGCTAGCATGCCGAACTCACCGTCACCATCACCAGTGCTTCAAGAGTTAAGTTATTTCCATGAGGGGACATCTACCAAAACTGAACCACATGAAGGCTCTGACTTTGGCGGGTATCCTTCCTTAAAGCAAAGGAATGAATCGTTTGATATTAAAGAATCCATGACCGTGCATTGTGGATTTGTAAAAGGATGCAGACCTGGTTACCAAACTGGATTTGATATTGATGTATCTGATCTTGTGGAGTTGGAGCAGTATCATGATATCATTGTTGCATCGGCCATATTTGGAAACTATGATGTAATTCAACAGCCTACTAAAATTAGCGAGGCTGCAAGTAGAAACATTCCGTTTTATATGTTTATTGACGAAGAGACTGAAGCATATATGAGAAACTCTAGTGCTTTGGACTACAGAATGAAGGTTGGATTGTGGAGAATTATTGTTGTCCGCAACATACCTTACACTGATTCAAGACGCAATGGAAAGGTCCCCAAGCTTCTACTACACAGAATCTTCCCAAATGTCCGGTATTCTATATGGATTGATGGGAAGCTGCGACTCGTTGTGGACCCATATAAACTTCTAGAGAGGTTCTTGTGGCGCCACAATGCAACTTTTGCAATTTCGAAACATTATAGGCGATTTGATGTGTTTGAAGAAGCTGAAGCTAATAAGGCTGCTGGGAAATACGACAATGCGTCCATTGATTACCAGATTGATTTTTACAGAAATGAGGGTTTAACACCTTATTCTGAAGCTAAGCTTCCCATAATCAGTGATGTTCCTGAAGGGTGTGTAATCATACGGGAACACATTCCGATAACAAATCTCTTCACGTGTTTGTGGTTCAATGAAGTTGACCGCTTTACTTCAAGGGATCAGTTAAGTTTTGCTATTGTAAGGGACAAAATTATGGCTCAAGTCAACTGGAGCATCAATATGTTCATGGATTGTGAAAGACGGAACTTTGTGATACAGGCATACCACCGGGATCTACTAGAGCATATGCCACCACCTGCACCTAAAGTGATTAATTTAAGGCGTACCCGAGCTCCTCCTATGCCTGTTCCTGTATCTGTGCGAGTTAATTCACCTGCTAGATATTCAGCAAAGAAAAACCCTGTTCGACGGAAAGGTGAAAGGAGACCTCGTTCAAGGAGGCATCCAAAAAATCCCAGTAATAGGGACAACACGGTCTTTTGA 1755 41.82 MTGLSLDIRTQSYASPQQPQNGSLQTQNGFIVRKSSRMSLSGSREKDRFLTFLCRYLSRKKVVMMILMSFALMAFLSGFFTSNREAASERTIFNPFNETFNASFQFSRFGNQKYNNSSTETTLSVCEVNPPTRRYSDASLSTGSVISHSNLCKNFAFPPPPPGDRRRPGPRPCPVCYLPVEEAMASMPNSPSPSPVLQELSYFHEGTSTKTEPHEGSDFGGYPSLKQRNESFDIKESMTVHCGFVKGCRPGYQTGFDIDVSDLVELEQYHDIIVASAIFGNYDVIQQPTKISEAASRNIPFYMFIDEETEAYMRNSSALDYRMKVGLWRIIVVRNIPYTDSRRNGKVPKLLLHRIFPNVRYSIWIDGKLRLVVDPYKLLERFLWRHNATFAISKHYRRFDVFEEAEANKAAGKYDNASIDYQIDFYRNEGLTPYSEAKLPIISDVPEGCVIIREHIPITNLFTCLWFNEVDRFTSRDQLSFAIVRDKIMAQVNWSINMFMDCERRNFVIQAYHRDLLEHMPPPAPKVINLRRTRAPPMPVPVSVRVNSPARYSAKKNPVRRKGERRPRSRRHPKNPSNRDNTVF 584
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aary13g03235 584 MobiDBLite consensus disorder prediction 538 584 - -
Aary13g03235 584 MobiDBLite consensus disorder prediction 1 28 - -
Aary13g03235 584 Pfam TOD1-MUCI70, glycosyltransferase-like domain 200 513 IPR048354 -
Aary13g03235 584 MobiDBLite consensus disorder prediction 555 573 - -
Aary13g03235 584 PANTHER ALKALINE CERAMIDASE-RELATED 36 543 IPR006852 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aary13g03235 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Aary Aary-Chr13:191072936 Aary4g01564 Aary-Chr4:98705507 dispersed
Aary Aary-Chr12:90612710 Aary13g03235 Aary-Chr13:191072936 wgd